RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 RFC4P35249 363 aa15.77■□□□□ 0.12
RCCD1-209ENST00000557750 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.12
RCCD1-209ENST00000557750 APLP1P51693 650 aa15.77■□□□□ 0.12
RCCD1-209ENST00000557750 NBPF26B4DH59 902 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 TOMM70O94826 608 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 MYL6BP14649 208 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 NBPF10Q6P3W6 841 aaKnown RBP15.76■□□□□ 0.11
RCCD1-209ENST00000557750 NBPF15Q8N660 670 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 PARP3Q9Y6F1 533 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 COL15A1P39059 1388 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
RCCD1-209ENST00000557750 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
RCCD1-209ENST00000557750 C4AP0C0L4 1744 aa15.75■□□□□ 0.11
RCCD1-209ENST00000557750 KCNA3P22001 575 aa15.75■□□□□ 0.11
RCCD1-209ENST00000557750 DNAJC5GQ8N7S2 189 aa15.75■□□□□ 0.11
RCCD1-209ENST00000557750 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
RCCD1-209ENST00000557750 A0A087WZG4 1122 aa15.74■□□□□ 0.11
RCCD1-209ENST00000557750 ANXA1P04083 346 aa15.74■□□□□ 0.11
RCCD1-209ENST00000557750 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
RCCD1-209ENST00000557750 TRMT2AQ8IZ69 625 aaKnown RBP15.74■□□□□ 0.11
RCCD1-209ENST00000557750 DBF4Q9UBU7 674 aaPredicted RBP15.74■□□□□ 0.11
RCCD1-209ENST00000557750 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
RCCD1-209ENST00000557750 VAMP4O75379 141 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 PROSER3Q2NL68 480 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 DDX21Q9NR30 783 aaKnown RBP eCLIP15.73■□□□□ 0.11
RCCD1-209ENST00000557750 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
RCCD1-209ENST00000557750 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
RCCD1-209ENST00000557750 ZPR1O75312 459 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 PDIA6Q15084 440 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
RCCD1-209ENST00000557750 SRP68Q9UHB9 627 aaKnown RBP15.73■□□□□ 0.11
RCCD1-209ENST00000557750 DZIP3Q86Y13 1208 aaKnown RBP15.72■□□□□ 0.11
RCCD1-209ENST00000557750 USP42Q9H9J4 1324 aaKnown RBP15.71■□□□□ 0.11
RCCD1-209ENST00000557750 FKBP8Q14318 412 aa15.71■□□□□ 0.11
RCCD1-209ENST00000557750 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
RCCD1-209ENST00000557750 PIM2Q9P1W9 311 aa15.71■□□□□ 0.11
RCCD1-209ENST00000557750 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
RCCD1-209ENST00000557750 BRCA1P38398 1863 aaKnown RBP15.7■□□□□ 0.1
RCCD1-209ENST00000557750 DDR1Q08345 913 aa15.7■□□□□ 0.1
RCCD1-209ENST00000557750 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
RCCD1-209ENST00000557750 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
RCCD1-209ENST00000557750 HYPKQ9NX55 129 aa15.7■□□□□ 0.1
RCCD1-209ENST00000557750 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
RCCD1-209ENST00000557750 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
RCCD1-209ENST00000557750 LRP10Q7Z4F1 713 aa15.7■□□□□ 0.1
RCCD1-209ENST00000557750 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
RCCD1-209ENST00000557750 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
RCCD1-209ENST00000557750 TTLL7Q6ZT98 887 aa15.69■□□□□ 0.1
RCCD1-209ENST00000557750 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
RCCD1-209ENST00000557750 CHRNA5P30532 468 aa15.68■□□□□ 0.1
RCCD1-209ENST00000557750 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
RCCD1-209ENST00000557750 HTRA3P83110 453 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 C16orf71Q8IYS4 520 aaPredicted RBP15.67■□□□□ 0.1
RCCD1-209ENST00000557750 ZBTB3Q9H5J0 574 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 PHAXQ9H814 394 aaKnown RBP15.67■□□□□ 0.1
RCCD1-209ENST00000557750 RNF181Q9P0P0 153 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 ZNF428Q96B54 188 aa15.67■□□□□ 0.1
RCCD1-209ENST00000557750 MAP3K15Q6ZN16 1313 aa15.66■□□□□ 0.1
RCCD1-209ENST00000557750 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
RCCD1-209ENST00000557750 TM4SF1P30408 202 aa15.66■□□□□ 0.1
RCCD1-209ENST00000557750 BCL2L12Q9HB09 334 aa15.66■□□□□ 0.1
RCCD1-209ENST00000557750 ZNF652Q9Y2D9 606 aa15.66■□□□□ 0.1
RCCD1-209ENST00000557750 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
RCCD1-209ENST00000557750 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
RCCD1-209ENST00000557750 BCL2L13Q9BXK5 485 aa15.65■□□□□ 0.1
RCCD1-209ENST00000557750 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
RCCD1-209ENST00000557750 ERVV-1B6SEH8 477 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 FSTL1Q12841 308 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 HLFQ16534 295 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 G2E3Q7L622 706 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 WDR90Q96KV7 1748 aa15.64■□□□□ 0.09
RCCD1-209ENST00000557750 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
RCCD1-209ENST00000557750 FLIIQ13045 1269 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 CLEC4GQ6UXB4 293 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 KLRG1Q96E93 195 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 FKBP5Q13451 457 aaPredicted RBP15.63■□□□□ 0.09
RCCD1-209ENST00000557750 ALDH1L2Q3SY69 923 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 TBC1D9BQ66K14 1250 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 PLBD2Q8NHP8 589 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
RCCD1-209ENST00000557750 RGL2O15211 777 aa15.62■□□□□ 0.09
RCCD1-209ENST00000557750 NFIXQ14938 502 aa15.62■□□□□ 0.09
RCCD1-209ENST00000557750 RARSP54136 660 aaKnown RBP15.61■□□□□ 0.09
RCCD1-209ENST00000557750 RASSF7Q02833 373 aa15.61■□□□□ 0.09
RCCD1-209ENST00000557750 GIGYF2Q6Y7W6 1299 aaKnown RBP15.61■□□□□ 0.09
RCCD1-209ENST00000557750 MRPL50Q8N5N7 158 aaKnown RBP15.61■□□□□ 0.09
RCCD1-209ENST00000557750 JMYQ8N9B5 988 aa15.61■□□□□ 0.09
RCCD1-209ENST00000557750 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
RCCD1-209ENST00000557750 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
RCCD1-209ENST00000557750 HSP90AB3PQ58FF7 597 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms