RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FAM182BQ5T319 152 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 TMEM214Q6NUQ4 689 aaKnown RBP3.05□□□□□ -1.92
HIF1A-212ENST00000557538 TRIM47Q96LD4 638 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 IGSF5Q9NSI5 407 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 TREHO43280 583 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 EFSO43281 561 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 FAM157BP0CG42 384 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 SERPINB4P48594 390 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 EHHADHQ08426 723 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 PHACTR1Q9C0D0 580 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 SAP130Q9H0E3 1048 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 DNAJC25Q9H1X3 360 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 F11P03951 625 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 INPP5BP32019 993 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 VTI1AQ96AJ9 217 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 SUSD3Q96L08 255 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 INSM2Q96T92 566 aaPredicted RBP3.05□□□□□ -1.92
HIF1A-212ENST00000557538 RAB6BQ9NRW1 208 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 AXIN1O15169 862 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 TATP17735 454 aaPredicted RBP3.04□□□□□ -1.92
HIF1A-212ENST00000557538 TXLNAP40222 546 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 MARSP56192 900 aaKnown RBP3.04□□□□□ -1.92
HIF1A-212ENST00000557538 RELBQ01201 579 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 PDE3BQ13370 1112 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 CFHR5Q9BXR6 569 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 CABP1Q9NZU7 370 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 SENP3-EIF4A1A0A087X0R7 540 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 FAM187AA6NFU0 413 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 ITGAEP38570 1179 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 PKDCCQ504Y2 493 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 CAPN12Q6ZSI9 719 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 ZSCAN29Q8IWY8 852 aaPredicted RBP3.04□□□□□ -1.92
HIF1A-212ENST00000557538 IFT43Q96FT9 208 aa3.04□□□□□ -1.92
HIF1A-212ENST00000557538 ZNF395Q9H8N7 513 aaPredicted RBP3.04□□□□□ -1.92
HIF1A-212ENST00000557538 OPLAHO14841 1288 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 MICAL2O94851 1124 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 EIF1AXP47813 144 aaKnown RBP3.03□□□□□ -1.92
HIF1A-212ENST00000557538 SLC27A3Q5K4L6 730 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 GLYCTKQ8IVS8 523 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 ETFBKMTQ8IXQ9 262 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 TRIM22Q8IYM9 498 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 FBF1Q8TES7 1133 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 H3BRB1 525 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 GIPC1O14908 333 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 MAP3K6O95382 1288 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 PDGFAP04085 211 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 VSIG8P0DPA2 414 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 FAM26DQ5JW98 314 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 FIGNL1Q6PIW4 674 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 TUT1Q9H6E5 874 aaKnown RBP3.03□□□□□ -1.92
HIF1A-212ENST00000557538 POLMQ9NP87 494 aaPredicted RBP3.03□□□□□ -1.92
HIF1A-212ENST00000557538 TIMMDC1Q9NPL8 285 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 AVENQ9NQS1 362 aaPredicted RBP3.03□□□□□ -1.92
HIF1A-212ENST00000557538 NDUFB5O43674 189 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 BMP2P12643 396 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 DNMT3LQ9UJW3 386 aa3.03□□□□□ -1.92
HIF1A-212ENST00000557538 THBS1P07996 1170 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 ARSDP51689 593 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 POU4F2Q12837 409 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 PDE12Q6L8Q7 609 aaKnown RBP3.02□□□□□ -1.93
HIF1A-212ENST00000557538 RHPN1Q8TCX5 695 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 PMEPA1Q969W9 287 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 ZFP42Q96MM3 310 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 H7C1W4 665 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 MPSTP25325 297 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 ENOX2Q16206 610 aaKnown RBP3.02□□□□□ -1.93
HIF1A-212ENST00000557538 MDFIQ99750 246 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 VEGFBP49765 207 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 DGKZQ13574 1117 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 SH3PXD2AQ5TCZ1 1133 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 TMC7Q7Z402 723 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 BTLAQ7Z6A9 289 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 KCNMB2Q9Y691 235 aa3.02□□□□□ -1.93
HIF1A-212ENST00000557538 A0A1W2PNR3 127 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 GRNP28799 593 aaKnown RBP3.01□□□□□ -1.93
HIF1A-212ENST00000557538 PLA2G4AP47712 749 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 ZNF211Q13398 564 aaPredicted RBP3.01□□□□□ -1.93
HIF1A-212ENST00000557538 PIK3R5Q8WYR1 880 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 IRX2Q9BZI1 471 aaPredicted RBP3.01□□□□□ -1.93
HIF1A-212ENST00000557538 BRPF3Q9ULD4 1205 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 PCDHGC4Q9Y5F7 938 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 ANKRD33BA6NCL7 494 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 ZAP70P43403 619 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 TNP2Q05952 138 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 TYRO3Q06418 890 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 TBCELQ5QJ74 424 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 LRRC4BQ9NT99 713 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 FNDC3AQ9Y2H6 1198 aaKnown RBP3.01□□□□□ -1.93
HIF1A-212ENST00000557538 HCN4Q9Y3Q4 1203 aa3.01□□□□□ -1.93
HIF1A-212ENST00000557538 LCE2BO14633 110 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 ZBTB39O15060 712 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 PLCB3Q01970 1234 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 MRPL58Q14197 206 aaKnown RBP3□□□□□ -1.93
HIF1A-212ENST00000557538 NAA30Q147X3 362 aaPredicted RBP3□□□□□ -1.93
HIF1A-212ENST00000557538 TREML1Q86YW5 311 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 PRPF40AO75400 957 aaKnown RBP3□□□□□ -1.93
HIF1A-212ENST00000557538 EPB42P16452 691 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 PCSK2P16519 638 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 SOX18P35713 384 aa3□□□□□ -1.93
HIF1A-212ENST00000557538 SCNN1AP37088 669 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms