RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, humanhuman

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-223ENST00000557320 ELF2Q15723 593 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 SLIT3O75094 1523 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 BMS1Q14692 1282 aaKnown RBP17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 CCDC186Q7Z3E2 898 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 ZNF215Q9UL58 517 aaPredicted RBP17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 CTR9Q6PD62 1173 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.44
PAPOLA-223ENST00000557320 LRMPQ12912 555 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 FBXO38Q6PIJ6 1188 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 NEK4P51957 841 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 GPS2Q13227 327 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 ATF7IPQ6VMQ6 1270 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 USP48Q86UV5 1035 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 CREBRFQ8IUR6 639 aa17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 BCCIPQ9P287 314 aaKnown RBP eCLIP17.81■□□□□ 0.44
PAPOLA-223ENST00000557320 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 CASQ1P31415 396 aa17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 GIMAP6Q6P9H5 292 aa17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 MYO1CO00159 1063 aa17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 CEP135Q66GS9 1140 aa17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
PAPOLA-223ENST00000557320 CASC1Q6TDU7 716 aa17.79■□□□□ 0.44
PAPOLA-223ENST00000557320 CWC15Q9P013 229 aaKnown RBP17.79■□□□□ 0.44
PAPOLA-223ENST00000557320 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
PAPOLA-223ENST00000557320 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
PAPOLA-223ENST00000557320 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
PAPOLA-223ENST00000557320 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 SLC12A5Q9H2X9 1139 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 ANKRD26Q9UPS8 1709 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 TXLNBQ8N3L3 684 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 NCAPGQ9BPX3 1015 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 USP31Q70CQ4 1352 aa17.78■□□□□ 0.44
PAPOLA-223ENST00000557320 NOP2P46087 812 aaKnown RBP17.77■□□□□ 0.44
PAPOLA-223ENST00000557320 EXOSC9Q06265 439 aaKnown RBP17.77■□□□□ 0.44
PAPOLA-223ENST00000557320 DEF6Q9H4E7 631 aa17.77■□□□□ 0.44
PAPOLA-223ENST00000557320 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.43
PAPOLA-223ENST00000557320 HDGFL2Q7Z4V5 671 aaPredicted RBP17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 REC8O95072 547 aa17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 TRIM5Q9C035 493 aa17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 TTC21BQ7Z4L5 1316 aa17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 APBB1O00213 710 aa17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
PAPOLA-223ENST00000557320 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 TPM4P67936 248 aa17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 MX1P20591 662 aa17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
PAPOLA-223ENST00000557320 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 ZSCAN26Q16670 478 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 NOM1Q5C9Z4 860 aaKnown RBP17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 OVOS2A0A0J9YW53 1432 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 OVOS2Q6IE36 1432 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 FIBPO43427 364 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 TMX3Q96JJ7 454 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 NWD2Q9ULI1 1742 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 JRKLQ9Y4A0 524 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 ABCC6O95255 1503 aa17.74■□□□□ 0.43
PAPOLA-223ENST00000557320 NFAT5O94916 1531 aa17.73■□□□□ 0.43
PAPOLA-223ENST00000557320 COL14A1Q05707 1796 aaKnown RBP17.73■□□□□ 0.43
PAPOLA-223ENST00000557320 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
PAPOLA-223ENST00000557320 BRD1O95696 1058 aa17.73■□□□□ 0.43
PAPOLA-223ENST00000557320 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
PAPOLA-223ENST00000557320 TRMT1Q9NXH9 659 aaKnown RBP17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 POLKQ9UBT6 870 aa17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 LCMT1Q9UIC8 334 aa17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 AP5Z1O43299 807 aa17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 E2F4Q16254 413 aa17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 GCC1Q96CN9 775 aa17.72■□□□□ 0.43
PAPOLA-223ENST00000557320 NRAPQ86VF7 1730 aa17.71■□□□□ 0.43
PAPOLA-223ENST00000557320 NRBP1Q9UHY1 535 aa17.71■□□□□ 0.43
PAPOLA-223ENST00000557320 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.43
PAPOLA-223ENST00000557320 CCDC27Q2M243 656 aa17.71■□□□□ 0.42
PAPOLA-223ENST00000557320 ERO1AQ96HE7 468 aa17.71■□□□□ 0.42
PAPOLA-223ENST00000557320 GUCY2CP25092 1073 aa17.7■□□□□ 0.42
PAPOLA-223ENST00000557320 TTC31Q49AM3 519 aaPredicted RBP17.7■□□□□ 0.42
PAPOLA-223ENST00000557320 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
PAPOLA-223ENST00000557320 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
PAPOLA-223ENST00000557320 SLU7O95391 586 aaKnown RBP17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.424e-12■■□□□ 13.9
PAPOLA-223ENST00000557320 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 CEP83Q9Y592 693 aa17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 NSD3Q9BZ95 1437 aa17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 COL18A1P39060 1754 aa17.69■□□□□ 0.42
PAPOLA-223ENST00000557320 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms