RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ANKRD31Q8N7Z5 1873 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 UBR2Q8IWV8 1755 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 LMNB1P20700 586 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 NFIXQ14938 502 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 E2F4Q16254 413 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 DCAF8Q5TAQ9 597 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 TNS4Q8IZW8 715 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 IL27Q8NEV9 243 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 ZC3H4Q9UPT8 1303 aaKnown RBP7.93□□□□□ -1.14
PRKCH-220ENST00000556164 COL15A1P39059 1388 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 MRC1P22897 1456 aa7.93□□□□□ -1.14
PRKCH-220ENST00000556164 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 CYP19A1P11511 503 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-220ENST00000556164 SLC39A6Q13433 755 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 KCTD17Q8N5Z5 321 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 KDM4CQ9H3R0 1056 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 SLC52A2Q9HAB3 445 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 NARFQ9UHQ1 456 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 ZBTB1Q9Y2K1 713 aa7.92□□□□□ -1.14
PRKCH-220ENST00000556164 COL11A2P13942 1736 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-220ENST00000556164 GLTPD2A6NH11 291 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 SERPINB2P05120 415 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 HSPA1AP0DMV8 641 aaKnown RBP7.91□□□□□ -1.14
PRKCH-220ENST00000556164 HSPA1BP0DMV9 641 aaKnown RBP7.91□□□□□ -1.14
PRKCH-220ENST00000556164 VEGFAP15692 232 aaPredicted RBP7.91□□□□□ -1.14
PRKCH-220ENST00000556164 IL13P35225 146 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 PRELPP51888 382 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 EIF4G2P78344 907 aaKnown RBP eCLIP7.91□□□□□ -1.14
PRKCH-220ENST00000556164 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
PRKCH-220ENST00000556164 BICDL1Q6ZP65 573 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 C2CD5Q86YS7 1000 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 TTLL6Q8N841 843 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 FAM212AQ96EL1 285 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 TRAIPQ9BWF2 469 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 CARMIL3Q8ND23 1372 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 SCN7AQ01118 1682 aa7.91□□□□□ -1.14
PRKCH-220ENST00000556164 H0YIN7 160 aa7.9□□□□□ -1.14
PRKCH-220ENST00000556164 RNMTO43148 476 aaKnown RBP7.9□□□□□ -1.14
PRKCH-220ENST00000556164 HMOX1P09601 288 aa7.9□□□□□ -1.14
PRKCH-220ENST00000556164 HSPA5P11021 654 aaKnown RBP7.9□□□□□ -1.14
PRKCH-220ENST00000556164 CANXP27824 592 aaKnown RBP7.9□□□□□ -1.14
PRKCH-220ENST00000556164 BCL2L12Q9HB09 334 aa7.9□□□□□ -1.14
PRKCH-220ENST00000556164 KNSTRNQ9Y448 316 aa7.9□□□□□ -1.14
PRKCH-220ENST00000556164 PCNTO95613 3336 aa7.9□□□□□ -1.15
PRKCH-220ENST00000556164 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
PRKCH-220ENST00000556164 NFKBIEO00221 500 aa7.89□□□□□ -1.15
PRKCH-220ENST00000556164 ZNF622Q969S3 477 aaKnown RBP eCLIP7.89□□□□□ -1.15
PRKCH-220ENST00000556164 SLX4Q8IY92 1834 aa7.89□□□□□ -1.15
PRKCH-220ENST00000556164 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
PRKCH-220ENST00000556164 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
PRKCH-220ENST00000556164 DPY19L2Q6NUT2 758 aa7.88□□□□□ -1.15
PRKCH-220ENST00000556164 TTC5Q8N0Z6 440 aa7.88□□□□□ -1.15
PRKCH-220ENST00000556164 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
PRKCH-220ENST00000556164 BCORQ6W2J9 1755 aa7.88□□□□□ -1.15
PRKCH-220ENST00000556164 A0A087WZG4 1122 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 A6NJR5 290 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 POTECB2RU33 542 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 NPHP1O15259 732 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 C21orf2O43822 256 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 STARD3NLO95772 234 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 PDE6BP35913 854 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
PRKCH-220ENST00000556164 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 CCDC24Q8N4L8 307 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 PCGF6Q9BYE7 350 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 SCN4AP35499 1836 aa7.87□□□□□ -1.15
PRKCH-220ENST00000556164 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 EIF5P55010 431 aaKnown RBP7.86□□□□□ -1.15
PRKCH-220ENST00000556164 PRR5LQ6MZQ0 368 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 BRIP1Q9BX63 1249 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 TAOK3Q9H2K8 898 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 MKRN1Q9UHC7 482 aaKnown RBP7.86□□□□□ -1.15
PRKCH-220ENST00000556164 PDZRN3Q9UPQ7 1066 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
PRKCH-220ENST00000556164 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
PRKCH-220ENST00000556164 HEG1Q9ULI3 1381 aa7.85□□□□□ -1.15
PRKCH-220ENST00000556164 DIAPH1O60610 1272 aaKnown RBP7.85□□□□□ -1.15
PRKCH-220ENST00000556164 TEFQ10587 303 aa7.85□□□□□ -1.15
PRKCH-220ENST00000556164 CNBD1Q8NA66 436 aa7.85□□□□□ -1.15
PRKCH-220ENST00000556164 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
PRKCH-220ENST00000556164 CREBZFQ9NS37 354 aa7.85□□□□□ -1.15
PRKCH-220ENST00000556164 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
PRKCH-220ENST00000556164 POTEIP0CG38 1075 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 POTEJP0CG39 1038 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 ST5P78524 1137 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.15
PRKCH-220ENST00000556164 ZNF790Q6PG37 636 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 CCDC82Q8N4S0 544 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 SETDB2Q96T68 719 aa7.84□□□□□ -1.15
PRKCH-220ENST00000556164 TEX13AQ9BXU3 409 aaPredicted RBP7.84□□□□□ -1.15
PRKCH-220ENST00000556164 GNAT3A8MTJ3 354 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 TRIM66O15016 1216 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
PRKCH-220ENST00000556164 A1BGP04217 495 aa7.83□□□□□ -1.16
PRKCH-220ENST00000556164 IL6STP40189 918 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms