RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 DDR1Q08345 913 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 ARHGAP27Q6ZUM4 889 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
NME1-NME2-203ENST00000555572 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
NME1-NME2-203ENST00000555572 VAMP4O75379 141 aa18.34■□□□□ 0.53
NME1-NME2-203ENST00000555572 TM4SF1P30408 202 aa18.34■□□□□ 0.53
NME1-NME2-203ENST00000555572 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
NME1-NME2-203ENST00000555572 TOMM70O94826 608 aa18.32■□□□□ 0.52
NME1-NME2-203ENST00000555572 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
NME1-NME2-203ENST00000555572 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
NME1-NME2-203ENST00000555572 ARFGEF1Q9Y6D6 1849 aa18.31■□□□□ 0.52
NME1-NME2-203ENST00000555572 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
NME1-NME2-203ENST00000555572 DBF4Q9UBU7 674 aaPredicted RBP18.31■□□□□ 0.52
NME1-NME2-203ENST00000555572 POLRMTO00411 1230 aaKnown RBP18.3■□□□□ 0.52
NME1-NME2-203ENST00000555572 C9orf131Q5VYM1 1079 aa18.3■□□□□ 0.52
NME1-NME2-203ENST00000555572 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
NME1-NME2-203ENST00000555572 DALRD3Q5D0E6 543 aaKnown RBP18.29■□□□□ 0.52
NME1-NME2-203ENST00000555572 DNAJC5GQ8N7S2 189 aa18.29■□□□□ 0.52
NME1-NME2-203ENST00000555572 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
NME1-NME2-203ENST00000555572 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
NME1-NME2-203ENST00000555572 A1BGP04217 495 aa18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 IL6STP40189 918 aaPredicted RBP18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 APLP1P51693 650 aa18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 NECTIN2Q92692 538 aa18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
NME1-NME2-203ENST00000555572 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
NME1-NME2-203ENST00000555572 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
NME1-NME2-203ENST00000555572 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 ZPR1O75312 459 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 CHRNA5P30532 468 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 PDIA6Q15084 440 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 USPL1Q5W0Q7 1092 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 NARFQ9UHQ1 456 aa18.26■□□□□ 0.51
NME1-NME2-203ENST00000555572 A0A087WZG4 1122 aa18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 NFIXQ14938 502 aa18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 COL15A1P39059 1388 aa18.25■□□□□ 0.51
NME1-NME2-203ENST00000555572 MYL6BP14649 208 aa18.24■□□□□ 0.51
NME1-NME2-203ENST00000555572 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
NME1-NME2-203ENST00000555572 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
NME1-NME2-203ENST00000555572 SSH1Q8WYL5 1049 aa18.24■□□□□ 0.51
NME1-NME2-203ENST00000555572 SBF1O95248 1867 aa18.23■□□□□ 0.51
NME1-NME2-203ENST00000555572 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
NME1-NME2-203ENST00000555572 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
NME1-NME2-203ENST00000555572 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
NME1-NME2-203ENST00000555572 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
NME1-NME2-203ENST00000555572 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
NME1-NME2-203ENST00000555572 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
NME1-NME2-203ENST00000555572 RCAN3Q9UKA8 241 aa18.22■□□□□ 0.51
NME1-NME2-203ENST00000555572 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
NME1-NME2-203ENST00000555572 NRXN2Q9P2S2 1712 aa18.21■□□□□ 0.51
NME1-NME2-203ENST00000555572 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
NME1-NME2-203ENST00000555572 MRPL50Q8N5N7 158 aaKnown RBP18.21■□□□□ 0.51
NME1-NME2-203ENST00000555572 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
NME1-NME2-203ENST00000555572 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
NME1-NME2-203ENST00000555572 SCN7AQ01118 1682 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 RGL2O15211 777 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 ANXA1P04083 346 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 SERPINB2P05120 415 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 FSTL1Q12841 308 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
NME1-NME2-203ENST00000555572 FLIIQ13045 1269 aa18.19■□□□□ 0.5
NME1-NME2-203ENST00000555572 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
NME1-NME2-203ENST00000555572 DZIP3Q86Y13 1208 aaKnown RBP18.19■□□□□ 0.5
NME1-NME2-203ENST00000555572 XAGE3Q8WTP9 111 aa18.19■□□□□ 0.5
NME1-NME2-203ENST00000555572 PTPRCP08575 1304 aa18.19■□□□□ 0.5
NME1-NME2-203ENST00000555572 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
NME1-NME2-203ENST00000555572 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
NME1-NME2-203ENST00000555572 RRAGCQ9HB90 399 aa18.18■□□□□ 0.5
NME1-NME2-203ENST00000555572 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
NME1-NME2-203ENST00000555572 ERVV-1B6SEH8 477 aa18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 PRELPP51888 382 aa18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 AIMP1Q12904 312 aaKnown RBP18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 ARFGEF2Q9Y6D5 1785 aa18.17■□□□□ 0.5
NME1-NME2-203ENST00000555572 PCNTO95613 3336 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 G2E3Q7L622 706 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 C16orf71Q8IYS4 520 aaPredicted RBP18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 PLBD2Q8NHP8 589 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 ARHGAP45Q92619 1136 aa18.16■□□□□ 0.5
NME1-NME2-203ENST00000555572 NUP98P52948 1817 aa18.15■□□□□ 0.5
NME1-NME2-203ENST00000555572 BCAR3O75815 825 aa18.15■□□□□ 0.5
NME1-NME2-203ENST00000555572 LMNB1P20700 586 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms