RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 BMS1Q14692 1282 aaKnown RBP18.58■□□□□ 0.56
SYNE3-203ENST00000554873 PLEKHG3A1L390 1219 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 CEP135Q66GS9 1140 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 TPD52L1Q16890 204 aaPredicted RBP18.57■□□□□ 0.56
SYNE3-203ENST00000554873 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
SYNE3-203ENST00000554873 ZNF215Q9UL58 517 aaPredicted RBP18.57■□□□□ 0.56
SYNE3-203ENST00000554873 CCDC186Q7Z3E2 898 aa18.56■□□□□ 0.56
SYNE3-203ENST00000554873 ERO1AQ96HE7 468 aa18.56■□□□□ 0.56
SYNE3-203ENST00000554873 CHMLP26374 656 aa18.56■□□□□ 0.56
SYNE3-203ENST00000554873 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
SYNE3-203ENST00000554873 RGPD1P0DJD0 1748 aa18.56■□□□□ 0.56
SYNE3-203ENST00000554873 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 ATP8B2P98198 1209 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 LRMPQ12912 555 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 RNF20Q5VTR2 975 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 USP31Q70CQ4 1352 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 RPAP1Q9BWH6 1393 aaPredicted RBP18.55■□□□□ 0.56
SYNE3-203ENST00000554873 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
SYNE3-203ENST00000554873 ANO2Q9NQ90 1003 aa18.55■□□□□ 0.56
SYNE3-203ENST00000554873 STK31Q9BXU1 1019 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 USP6P35125 1406 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
SYNE3-203ENST00000554873 MCCP23508 829 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 PSEN1P49768 467 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 ELF2Q15723 593 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 TXLNBQ8N3L3 684 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 ZNF446Q9NWS9 450 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
SYNE3-203ENST00000554873 GTF2A1P52655 376 aaPredicted RBP18.53■□□□□ 0.56
SYNE3-203ENST00000554873 FLIIQ13045 1269 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 ZSCAN25Q6NSZ9 544 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 ZNF592Q92610 1267 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 GNAI3P08754 354 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 ANAPC15P60006 121 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 TEX35Q5T0J7 233 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 UNC5CLQ8IV45 518 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 SRCIN1Q9C0H9 1055 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
SYNE3-203ENST00000554873 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
SYNE3-203ENST00000554873 STAP2Q9UGK3 403 aa18.52■□□□□ 0.56
SYNE3-203ENST00000554873 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
SYNE3-203ENST00000554873 FAM200AQ8TCP9 573 aa18.52■□□□□ 0.55
SYNE3-203ENST00000554873 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.55
SYNE3-203ENST00000554873 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.52■□□□□ 0.55
SYNE3-203ENST00000554873 V9GYY5 206 aaPredicted RBP18.52■□□□□ 0.55
SYNE3-203ENST00000554873 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
SYNE3-203ENST00000554873 EYA1Q99502 592 aa18.51■□□□□ 0.55
SYNE3-203ENST00000554873 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
SYNE3-203ENST00000554873 CLGNO14967 610 aa18.51■□□□□ 0.55
SYNE3-203ENST00000554873 DRC7Q8IY82 874 aa18.51■□□□□ 0.55
SYNE3-203ENST00000554873 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
SYNE3-203ENST00000554873 LRRFIP2Q9Y608 721 aaKnown RBP18.5■□□□□ 0.55
SYNE3-203ENST00000554873 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-203ENST00000554873 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
SYNE3-203ENST00000554873 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.5■□□□□ 0.55
SYNE3-203ENST00000554873 TUBGCP6Q96RT7 1819 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 CASQ1P31415 396 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 ICE2Q659A1 982 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 GTF3C6Q969F1 213 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 IL17RAQ96F46 866 aa18.5■□□□□ 0.55
SYNE3-203ENST00000554873 IL25Q9H293 177 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 KDRP35968 1356 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 TSPOAP1O95153 1857 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 SLU7O95391 586 aaKnown RBP18.49■□□□□ 0.55
SYNE3-203ENST00000554873 H2AFXP16104 143 aaPredicted RBP18.49■□□□□ 0.55
SYNE3-203ENST00000554873 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
SYNE3-203ENST00000554873 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
SYNE3-203ENST00000554873 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 TPRNQ4KMQ1 711 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 AXDND1Q5T1B0 1012 aaPredicted RBP18.48■□□□□ 0.55
SYNE3-203ENST00000554873 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 MYO1CO00159 1063 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
SYNE3-203ENST00000554873 NEK11Q8NG66 645 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 NRBP1Q9UHY1 535 aa18.48■□□□□ 0.55
SYNE3-203ENST00000554873 ADAMTS13Q76LX8 1427 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 TMEM2Q9UHN6 1383 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 ERBB3P21860 1342 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 FLT4P35916 1363 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 AMPHP49418 695 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 TPM4P67936 248 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 PTPN14Q15678 1187 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 KRBA2Q6ZNG9 492 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
SYNE3-203ENST00000554873 SBNO1A3KN83 1393 aa18.46■□□□□ 0.55
SYNE3-203ENST00000554873 NYAP1Q6ZVC0 841 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms