RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
CNOT2-243ENST00000553078 NEURL1BA8MQ27 555 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
CNOT2-243ENST00000553078 SPRYD3Q8NCJ5 442 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
CNOT2-243ENST00000553078 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 ANO2Q9NQ90 1003 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
CNOT2-243ENST00000553078 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
CNOT2-243ENST00000553078 ANAPC15P60006 121 aa12.42□□□□□ -0.42
CNOT2-243ENST00000553078 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
CNOT2-243ENST00000553078 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
CNOT2-243ENST00000553078 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
CNOT2-243ENST00000553078 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
CNOT2-243ENST00000553078 COL15A1P39059 1388 aa12.42□□□□□ -0.42
CNOT2-243ENST00000553078 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
CNOT2-243ENST00000553078 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-243ENST00000553078 FRAT2O75474 233 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-243ENST00000553078 GCKRQ14397 625 aa12.41□□□□□ -0.42
CNOT2-243ENST00000553078 PDIA6Q15084 440 aa12.41□□□□□ -0.42
CNOT2-243ENST00000553078 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
CNOT2-243ENST00000553078 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
CNOT2-243ENST00000553078 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 CHMLP26374 656 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 NUCB2P80303 420 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 GSE1Q14687 1217 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 AACSQ86V21 672 aa12.4□□□□□ -0.42
CNOT2-243ENST00000553078 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
CNOT2-243ENST00000553078 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
CNOT2-243ENST00000553078 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
CNOT2-243ENST00000553078 CDCA7Q9BWT1 371 aaPredicted RBP12.39□□□□□ -0.43
CNOT2-243ENST00000553078 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
CNOT2-243ENST00000553078 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 RAD50Q92878 1312 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
CNOT2-243ENST00000553078 A0A087WZG4 1122 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 STARD3NLO95772 234 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
CNOT2-243ENST00000553078 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
CNOT2-243ENST00000553078 ROBO1Q9Y6N7 1651 aa12.38□□□□□ -0.43
CNOT2-243ENST00000553078 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 LRP6O75581 1613 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 KIF2CQ99661 725 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
CNOT2-243ENST00000553078 MCM4P33991 863 aa12.36□□□□□ -0.43
CNOT2-243ENST00000553078 HSP90AB3PQ58FF7 597 aa12.36□□□□□ -0.43
CNOT2-243ENST00000553078 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
CNOT2-243ENST00000553078 UBE3BQ7Z3V4 1068 aa12.36□□□□□ -0.43
CNOT2-243ENST00000553078 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
CNOT2-243ENST00000553078 TUBGCP6Q96RT7 1819 aa12.35□□□□□ -0.43
CNOT2-243ENST00000553078 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
CNOT2-243ENST00000553078 KCNJ4P48050 445 aa12.35□□□□□ -0.43
CNOT2-243ENST00000553078 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
CNOT2-243ENST00000553078 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
CNOT2-243ENST00000553078 SIL1Q9H173 461 aa12.35□□□□□ -0.43
CNOT2-243ENST00000553078 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
CNOT2-243ENST00000553078 GLI3P10071 1580 aa12.35□□□□□ -0.43
CNOT2-243ENST00000553078 RFX7Q2KHR2 1363 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 EXOC5O00471 708 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 SGSM2O43147 1006 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 COPRSQ9NQ92 184 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
CNOT2-243ENST00000553078 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
CNOT2-243ENST00000553078 MAP4K4O95819 1239 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-243ENST00000553078 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-243ENST00000553078 NEK4P51957 841 aa12.33□□□□□ -0.44
CNOT2-243ENST00000553078 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CNOT2-243ENST00000553078 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-243ENST00000553078 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
CNOT2-243ENST00000553078 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CNOT2-243ENST00000553078 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
CNOT2-243ENST00000553078 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
CNOT2-243ENST00000553078 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
CNOT2-243ENST00000553078 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
CNOT2-243ENST00000553078 PIP4K2AP48426 406 aaPredicted RBP12.32□□□□□ -0.44
CNOT2-243ENST00000553078 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
CNOT2-243ENST00000553078 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
CNOT2-243ENST00000553078 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
CNOT2-243ENST00000553078 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
CNOT2-243ENST00000553078 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
CNOT2-243ENST00000553078 HSPA4P34932 840 aa12.31□□□□□ -0.44
CNOT2-243ENST00000553078 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
CNOT2-243ENST00000553078 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
CNOT2-243ENST00000553078 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CNOT2-243ENST00000553078 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
CNOT2-243ENST00000553078 H7C1W4 665 aa12.3□□□□□ -0.44
CNOT2-243ENST00000553078 TOM1O60784 492 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms