RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 USP44Q9H0E7 712 aa8.41□□□□□ -1.06
CCDC59-206ENST00000552412 SLC52A2Q9HAB3 445 aa8.41□□□□□ -1.06
CCDC59-206ENST00000552412 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC59-206ENST00000552412 CHPF2Q9P2E5 772 aa8.41□□□□□ -1.06
CCDC59-206ENST00000552412 STAP2Q9UGK3 403 aa8.41□□□□□ -1.06
CCDC59-206ENST00000552412 ADCY9O60503 1353 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 ERBB4Q15303 1308 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 REC8O95072 547 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 PDE1AP54750 535 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
CCDC59-206ENST00000552412 ANTXR1Q9H6X2 564 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 NLRP2Q9NX02 1062 aa8.4□□□□□ -1.06
CCDC59-206ENST00000552412 LRRFIP2Q9Y608 721 aaKnown RBP8.4□□□□□ -1.06
CCDC59-206ENST00000552412 C5P01031 1676 aa8.4□□□□□ -1.07
CCDC59-206ENST00000552412 COL15A1P39059 1388 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 UTYO14607 1347 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 WDR17Q8IZU2 1322 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 PI4KAP2A4QPH2 592 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 EIF2S2P20042 333 aaKnown RBP8.39□□□□□ -1.07
CCDC59-206ENST00000552412 SLC4A3P48751 1232 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 RABEP1Q15276 862 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 ZNF790Q6PG37 636 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 KSR2Q6VAB6 950 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 PI4KAP1Q8N8J0 262 aa8.39□□□□□ -1.07
CCDC59-206ENST00000552412 PHAXQ9H814 394 aaKnown RBP8.39□□□□□ -1.07
CCDC59-206ENST00000552412 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
CCDC59-206ENST00000552412 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 PCDH11XQ9BZA7 1347 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 PCDH11YQ9BZA8 1340 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 USP42Q9H9J4 1324 aaKnown RBP8.38□□□□□ -1.07
CCDC59-206ENST00000552412 PNMA6EA0A0J9YXQ4 647 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 RIOK3O14730 519 aaKnown RBP8.38□□□□□ -1.07
CCDC59-206ENST00000552412 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 SDSP20132 328 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 MX1P20591 662 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 ERC1Q8IUD2 1116 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 LINS1Q8NG48 757 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 FAM163AQ96GL9 167 aaPredicted RBP8.38□□□□□ -1.07
CCDC59-206ENST00000552412 CHMP5Q9NZZ3 219 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
CCDC59-206ENST00000552412 AK9Q5TCS8 1911 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 GLI3P10071 1580 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 ERC2O15083 957 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 KCNQ3O43525 872 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
CCDC59-206ENST00000552412 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
CCDC59-206ENST00000552412 HSPA2P54652 639 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
CCDC59-206ENST00000552412 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
CCDC59-206ENST00000552412 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 ERVV-2B6SEH9 535 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-206ENST00000552412 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-206ENST00000552412 PPP1R42Q7Z4L9 355 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 C16orf71Q8IYS4 520 aaPredicted RBP8.36□□□□□ -1.07
CCDC59-206ENST00000552412 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 IL17RAQ96F46 866 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 KIF2CQ99661 725 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 PRDM11Q9NQV5 511 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
CCDC59-206ENST00000552412 SHANK3Q9BYB0 1731 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-206ENST00000552412 GRM8O00222 908 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 CYP27B1O15528 508 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 SRGAP3O43295 1099 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 PTMSP20962 102 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 MCCP23508 829 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 DDIT3P35638 169 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 DEKP35659 375 aaKnown RBP8.35□□□□□ -1.07
CCDC59-206ENST00000552412 ANAPC15P60006 121 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 PDIA6Q15084 440 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 OTUD7AQ8TE49 926 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-206ENST00000552412 C9orf78Q9NZ63 289 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-206ENST00000552412 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 COL22A1Q8NFW1 1626 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-206ENST00000552412 TNS2Q63HR2 1409 aa8.35□□□□□ -1.07
CCDC59-206ENST00000552412 PLCH1Q4KWH8 1693 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 LRP6O75581 1613 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 AHDC1Q5TGY3 1603 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 G3V3G9 751 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 SURF6O75683 361 aaKnown RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 MCM2P49736 904 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 CHRNA2Q15822 529 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 DDX17Q92841 729 aaKnown RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 SLKQ9H2G2 1235 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 COL14A1Q05707 1796 aaKnown RBP8.34□□□□□ -1.07
CCDC59-206ENST00000552412 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
CCDC59-206ENST00000552412 ZNF335Q9H4Z2 1342 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms