RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
PFDN5-216ENST00000552341 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
PFDN5-216ENST00000552341 SRGAP3O43295 1099 aa13.46□□□□□ -0.25
PFDN5-216ENST00000552341 MYD88Q99836 296 aa13.46□□□□□ -0.25
PFDN5-216ENST00000552341 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-216ENST00000552341 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-216ENST00000552341 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 OSBPL3Q9H4L5 887 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 KCNA4P22459 653 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 NEXNQ0ZGT2 675 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
PFDN5-216ENST00000552341 TUBGCP6Q96RT7 1819 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
PFDN5-216ENST00000552341 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 C8orf37Q96NL8 207 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-216ENST00000552341 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-216ENST00000552341 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
PFDN5-216ENST00000552341 TJP1Q07157 1748 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
PFDN5-216ENST00000552341 VPS72Q15906 364 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 BICC1Q9H694 974 aaKnown RBP13.43□□□□□ -0.26
PFDN5-216ENST00000552341 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 PDE1AP54750 535 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 COL15A1P39059 1388 aa13.43□□□□□ -0.26
PFDN5-216ENST00000552341 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
PFDN5-216ENST00000552341 CASP7P55210 303 aa13.42□□□□□ -0.26
PFDN5-216ENST00000552341 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
PFDN5-216ENST00000552341 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
PFDN5-216ENST00000552341 TBC1D9Q6ZT07 1266 aa13.41□□□□□ -0.26
PFDN5-216ENST00000552341 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
PFDN5-216ENST00000552341 CCDC9Q9Y3X0 531 aaKnown RBP13.41□□□□□ -0.26
PFDN5-216ENST00000552341 CYP19A1P11511 503 aaPredicted RBP13.41□□□□□ -0.26
PFDN5-216ENST00000552341 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
PFDN5-216ENST00000552341 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
PFDN5-216ENST00000552341 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
PFDN5-216ENST00000552341 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
PFDN5-216ENST00000552341 STARD3NLO95772 234 aa13.4□□□□□ -0.26
PFDN5-216ENST00000552341 SDSP20132 328 aa13.4□□□□□ -0.27
PFDN5-216ENST00000552341 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.27
PFDN5-216ENST00000552341 H7C1W4 665 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 MX1P20591 662 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
PFDN5-216ENST00000552341 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
PFDN5-216ENST00000552341 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
PFDN5-216ENST00000552341 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
PFDN5-216ENST00000552341 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 PA2G4Q9UQ80 394 aaKnown RBP13.39□□□□□ -0.27
PFDN5-216ENST00000552341 THSD7AQ9UPZ6 1657 aa13.39□□□□□ -0.27
PFDN5-216ENST00000552341 A0A087WZG4 1122 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 CDC45O75419 566 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 HSPA1LP34931 641 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-216ENST00000552341 TSHZ3Q63HK5 1081 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 ISCA1Q9BUE6 129 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
PFDN5-216ENST00000552341 RREB1Q92766 1687 aa13.37□□□□□ -0.27
PFDN5-216ENST00000552341 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-216ENST00000552341 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
PFDN5-216ENST00000552341 CWC25Q9NXE8 425 aaPredicted RBP13.37□□□□□ -0.27
PFDN5-216ENST00000552341 USP21Q9UK80 565 aa13.37□□□□□ -0.27
PFDN5-216ENST00000552341 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
PFDN5-216ENST00000552341 AOX1Q06278 1338 aa13.37□□□□□ -0.27
PFDN5-216ENST00000552341 KCNQ2O43526 872 aa13.36□□□□□ -0.27
PFDN5-216ENST00000552341 SASH1O94885 1247 aa13.36□□□□□ -0.27
PFDN5-216ENST00000552341 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
PFDN5-216ENST00000552341 TCIRG1Q13488 830 aa13.36□□□□□ -0.27
PFDN5-216ENST00000552341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.36□□□□□ -0.27
PFDN5-216ENST00000552341 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
PFDN5-216ENST00000552341 FOXO4P98177 505 aa13.36□□□□□ -0.27
PFDN5-216ENST00000552341 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
PFDN5-216ENST00000552341 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 NUTM1Q86Y26 1132 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 MAP3K15Q6ZN16 1313 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 MYH14Q7Z406 1995 aaKnown RBP13.35□□□□□ -0.27
PFDN5-216ENST00000552341 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
PFDN5-216ENST00000552341 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
PFDN5-216ENST00000552341 NUP98P52948 1817 aa13.34□□□□□ -0.27
PFDN5-216ENST00000552341 LOC102724428A0A0B4J2F2 783 aa13.34□□□□□ -0.27
PFDN5-216ENST00000552341 IL6STP40189 918 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 SIK1P57059 783 aa13.34□□□□□ -0.27
PFDN5-216ENST00000552341 ITPK1Q13572 414 aa13.34□□□□□ -0.27
PFDN5-216ENST00000552341 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 ERC1Q8IUD2 1116 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms