RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
CHPT1-209ENST00000552329 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
CHPT1-209ENST00000552329 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
CHPT1-209ENST00000552329 ATXN7O15265 892 aaPredicted RBP11.76□□□□□ -0.53
CHPT1-209ENST00000552329 FOXO3O43524 673 aa11.76□□□□□ -0.53
CHPT1-209ENST00000552329 NAA30Q147X3 362 aaPredicted RBP11.76□□□□□ -0.53
CHPT1-209ENST00000552329 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
CHPT1-209ENST00000552329 KLK14Q9P0G3 267 aa11.76□□□□□ -0.53
CHPT1-209ENST00000552329 CXXC1Q9P0U4 656 aaPredicted RBP11.76□□□□□ -0.53
CHPT1-209ENST00000552329 KHNYNO15037 678 aaKnown RBP11.75□□□□□ -0.53
CHPT1-209ENST00000552329 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
CHPT1-209ENST00000552329 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
CHPT1-209ENST00000552329 NLRP8Q86W28 1048 aa11.75□□□□□ -0.53
CHPT1-209ENST00000552329 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
CHPT1-209ENST00000552329 SUSD3Q96L08 255 aa11.74□□□□□ -0.53
CHPT1-209ENST00000552329 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
CHPT1-209ENST00000552329 PCDHGC4Q9Y5F7 938 aa11.74□□□□□ -0.53
CHPT1-209ENST00000552329 DGKZQ13574 1117 aa11.73□□□□□ -0.53
CHPT1-209ENST00000552329 LBRQ14739 615 aaKnown RBP11.73□□□□□ -0.53
CHPT1-209ENST00000552329 FIGNL1Q6PIW4 674 aa11.73□□□□□ -0.53
CHPT1-209ENST00000552329 CD33P20138 364 aa11.72□□□□□ -0.53
CHPT1-209ENST00000552329 MX2P20592 715 aa11.72□□□□□ -0.53
CHPT1-209ENST00000552329 HCN2Q9UL51 889 aa11.72□□□□□ -0.53
CHPT1-209ENST00000552329 WIPF1O43516 503 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
CHPT1-209ENST00000552329 CTBSQ01459 385 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 RTN1Q16799 776 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 SAP130Q9H0E3 1048 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
CHPT1-209ENST00000552329 FGFR3P22607 806 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 GRIN2CQ14957 1233 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 CEP63Q96MT8 703 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 NDFIP2Q9NV92 336 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
CHPT1-209ENST00000552329 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
CHPT1-209ENST00000552329 TNP2Q05952 138 aa11.69□□□□□ -0.54
CHPT1-209ENST00000552329 CFHR5Q9BXR6 569 aa11.69□□□□□ -0.54
CHPT1-209ENST00000552329 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
CHPT1-209ENST00000552329 IGF1RP08069 1367 aa11.68□□□□□ -0.54
CHPT1-209ENST00000552329 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
CHPT1-209ENST00000552329 COX20Q5RI15 118 aa11.68□□□□□ -0.54
CHPT1-209ENST00000552329 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
CHPT1-209ENST00000552329 BMP4P12644 408 aa11.67□□□□□ -0.54
CHPT1-209ENST00000552329 SFSWAPQ12872 951 aaKnown RBP11.67□□□□□ -0.54
CHPT1-209ENST00000552329 WHAMMQ8TF30 809 aa11.67□□□□□ -0.54
CHPT1-209ENST00000552329 C2CD2LO14523 706 aa11.66□□□□□ -0.54
CHPT1-209ENST00000552329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHPT1-209ENST00000552329 GPC6Q9Y625 555 aaPredicted RBP11.66□□□□□ -0.54
CHPT1-209ENST00000552329 SSFA2P28290 1259 aa11.65□□□□□ -0.54
CHPT1-209ENST00000552329 BTLAQ7Z6A9 289 aa11.65□□□□□ -0.54
CHPT1-209ENST00000552329 BRD7Q9NPI1 651 aa11.65□□□□□ -0.54
CHPT1-209ENST00000552329 FAM157BP0CG42 384 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 C11orf91Q3C1V1 193 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 C16orf46Q6P387 395 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 RAB44Q7Z6P3 723 aaPredicted RBP11.64□□□□□ -0.55
CHPT1-209ENST00000552329 ZSCAN1Q8NBB4 408 aa11.64□□□□□ -0.55
CHPT1-209ENST00000552329 SRSF11Q05519 484 aaKnown RBP11.63□□□□□ -0.55
CHPT1-209ENST00000552329 TYRO3Q06418 890 aa11.63□□□□□ -0.55
CHPT1-209ENST00000552329 FAM26DQ5JW98 314 aa11.63□□□□□ -0.55
CHPT1-209ENST00000552329 IFT43Q96FT9 208 aa11.63□□□□□ -0.55
CHPT1-209ENST00000552329 MARK1Q9P0L2 795 aa11.63□□□□□ -0.55
CHPT1-209ENST00000552329 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
CHPT1-209ENST00000552329 TGFBR3LH3BV60 316 aa11.62□□□□□ -0.55
CHPT1-209ENST00000552329 EFSO43281 561 aa11.62□□□□□ -0.55
CHPT1-209ENST00000552329 LORP23490 312 aaPredicted RBP11.62□□□□□ -0.55
CHPT1-209ENST00000552329 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
CHPT1-209ENST00000552329 MYO19Q96H55 970 aa11.62□□□□□ -0.55
CHPT1-209ENST00000552329 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
CHPT1-209ENST00000552329 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
CHPT1-209ENST00000552329 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
CHPT1-209ENST00000552329 IDH3AP50213 366 aa11.61□□□□□ -0.55
CHPT1-209ENST00000552329 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
CHPT1-209ENST00000552329 SLURP2P0DP57 97 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 MTMR3Q13615 1198 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 HIF1AQ16665 826 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 SVOPQ8N4V2 548 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 ACDQ96AP0 544 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
CHPT1-209ENST00000552329 MICAL2O94851 1124 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
CHPT1-209ENST00000552329 TREML1Q86YW5 311 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 ETFBKMTQ8IXQ9 262 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 COL26A1Q96A83 441 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 SLC30A3Q99726 388 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
CHPT1-209ENST00000552329 DMGDHQ9UI17 866 aaKnown RBP11.59□□□□□ -0.55
CHPT1-209ENST00000552329 TNFRSF10BO14763 440 aa11.58□□□□□ -0.56
CHPT1-209ENST00000552329 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
CHPT1-209ENST00000552329 GTF3C2Q8WUA4 911 aaPredicted RBP11.58□□□□□ -0.56
CHPT1-209ENST00000552329 KCNH4Q9UQ05 1017 aa11.58□□□□□ -0.56
CHPT1-209ENST00000552329 ABL1P00519 1130 aa11.57□□□□□ -0.56
CHPT1-209ENST00000552329 MAP2K3P46734 347 aa11.57□□□□□ -0.56
CHPT1-209ENST00000552329 OXCT2Q9BYC2 517 aaPredicted RBP11.57□□□□□ -0.56
CHPT1-209ENST00000552329 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
CHPT1-209ENST00000552329 ZBTB39O15060 712 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms