RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZAP70P43403 619 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 PSMD2Q13200 908 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 DGKZQ13574 1117 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 Q6ZVU0 165 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 PPARGC1BQ86YN6 1023 aaKnown RBP6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 L3MBTL2Q969R5 705 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 IFT43Q96FT9 208 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 MRGPRX2Q96LB1 330 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 KLF16Q9BXK1 252 aaPredicted RBP6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 HCN4Q9Y3Q4 1203 aa6.31□□□□□ -1.4
LSM6P2-201ENST00000552208 PNMA6FA0A0J9YX94 578 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 GNA15P30679 374 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 PTGIRP43119 386 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 ATP2B2Q01814 1243 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 DNM1Q05193 864 aaKnown RBP6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 SLC43A3Q8NBI5 491 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 FBF1Q8TES7 1133 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 EDEM1Q92611 657 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 RNF34Q969K3 372 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 NGLY1Q96IV0 654 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 TINF2Q9BSI4 451 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 TGIF2Q9GZN2 237 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 MRS2Q9HD23 443 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 KLK14Q9P0G3 267 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
LSM6P2-201ENST00000552208 CTSHP09668 335 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 CBLBQ13191 982 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 CSRNP1Q96S65 589 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 PHACTR1Q9C0D0 580 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 GGNBP2Q9H3C7 697 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 VTI1BQ9UEU0 232 aa6.29□□□□□ -1.4
LSM6P2-201ENST00000552208 ZNF76P36508 570 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 CABP1Q9NZU7 370 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 ZNF232Q9UNY5 417 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 PARP3Q9Y6F1 533 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 AK5Q9Y6K8 562 aa6.28□□□□□ -1.4
LSM6P2-201ENST00000552208 EIF1AYO14602 144 aaKnown RBP6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 ORC1Q13415 861 aa6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 NNTQ13423 1086 aa6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 TREML1Q86YW5 311 aa6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 DNAJC25Q9H1X3 360 aa6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 DMGDHQ9UI17 866 aaKnown RBP6.27□□□□□ -1.41
LSM6P2-201ENST00000552208 OPLAHO14841 1288 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 TXLNAP40222 546 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 SLC19A1P41440 591 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 GPR152Q8TDT2 470 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 NUDT16Q96DE0 195 aaKnown RBP6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 ITPKCQ96DU7 683 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 CRELD1Q96HD1 420 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 GMLQ99445 158 aa6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 PPP1R1BQ9UD71 204 aaPredicted RBP6.26□□□□□ -1.41
LSM6P2-201ENST00000552208 XKR5Q6UX68 686 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 RHBDD1Q8TEB9 315 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 AGBL1Q96MI9 1066 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 GRIP2Q9C0E4 1043 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 ACBD3Q9H3P7 528 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 V9GY48 417 aaPredicted RBP6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 CADPSQ9ULU8 1353 aa6.25□□□□□ -1.41
LSM6P2-201ENST00000552208 MEN1O00255 615 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 MICAL2O94851 1124 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 ALDH1A1P00352 501 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 RPLP1P05386 114 aaKnown RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 HSP90B1P14625 803 aaKnown RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 PCSK2P16519 638 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 GPC1P35052 558 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 PTPN12Q05209 780 aaKnown RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 KLRG1Q96E93 195 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 SPATA32Q96LK8 384 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 TANGO6Q9C0B7 1094 aa6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
LSM6P2-201ENST00000552208 A6NHS1 94 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 TGFBR3LH3BV60 316 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 NEFLP07196 543 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 HMGB1P09429 215 aaKnown RBP6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 CANXP27824 592 aaKnown RBP6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 RACK1P63244 317 aaKnown RBP6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 IER5Q5VY09 327 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 SPRYD7Q5W111 196 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 ZNF598Q86UK7 904 aaKnown RBP6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 CCSER2Q9H7U1 834 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 ZFAND3Q9H8U3 227 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 SRA1Q9HD15 236 aaKnown RBP6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 FAM13BQ9NYF5 915 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 PKD2L1Q9P0L9 805 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
LSM6P2-201ENST00000552208 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 CPNE3O75131 537 aaKnown RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 ZIC2O95409 532 aaPredicted RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 TIMP2P16035 220 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 TNNI2P48788 182 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms