RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 TJP1Q07157 1748 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 KIF7Q2M1P5 1343 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 RNMTO43148 476 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 CANXP27824 592 aaKnown RBP9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 TGFB2P61812 414 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 AMOTQ4VCS5 1084 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 IER5LQ5T953 404 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 RNF181Q9P0P0 153 aa9.32□□□□□ -0.92
PRPF40B-214ENST00000551320 KCNQ3O43525 872 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 CYP19A1P11511 503 aaPredicted RBP9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 TM4SF1P30408 202 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 NFIXQ14938 502 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 PIM2Q9P1W9 311 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
PRPF40B-214ENST00000551320 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
PRPF40B-214ENST00000551320 DNAJC5GQ8N7S2 189 aa9.3□□□□□ -0.92
PRPF40B-214ENST00000551320 PDCD7Q8N8D1 485 aaKnown RBP9.3□□□□□ -0.92
PRPF40B-214ENST00000551320 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
PRPF40B-214ENST00000551320 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 ZPR1O75312 459 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
PRPF40B-214ENST00000551320 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
PRPF40B-214ENST00000551320 SCN11AQ9UI33 1791 aa9.28□□□□□ -0.92
PRPF40B-214ENST00000551320 SERPINB2P05120 415 aa9.28□□□□□ -0.92
PRPF40B-214ENST00000551320 IL17REQ8NFR9 667 aa9.28□□□□□ -0.92
PRPF40B-214ENST00000551320 OCEL1Q9H607 264 aa9.28□□□□□ -0.92
PRPF40B-214ENST00000551320 COL15A1P39059 1388 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 PER1O15534 1290 aaPredicted RBP9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 DIAPH1O60610 1272 aaKnown RBP9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 TOMM70O94826 608 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 A1BGP04217 495 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 TBC1D9BQ66K14 1250 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 SLC51AQ86UW1 340 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 C2CD5Q86YS7 1000 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 ZNF496Q96IT1 587 aaPredicted RBP9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 PHACTR3Q96KR7 559 aa9.27□□□□□ -0.93
PRPF40B-214ENST00000551320 AFDNP55196 1824 aaKnown RBP9.26□□□□□ -0.93
PRPF40B-214ENST00000551320 PLCG2P16885 1265 aa9.26□□□□□ -0.93
PRPF40B-214ENST00000551320 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
PRPF40B-214ENST00000551320 ZNF622Q969S3 477 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRPF40B-214ENST00000551320 NARFQ9UHQ1 456 aa9.26□□□□□ -0.93
PRPF40B-214ENST00000551320 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 NFKBIEO00221 500 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 C21orf2O43822 256 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 APLP1P51693 650 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 COL13A1Q5TAT6 717 aaPredicted RBP9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 ZNF831Q5JPB2 1677 aa9.25□□□□□ -0.93
PRPF40B-214ENST00000551320 SEC24BO95487 1268 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 POTEJP0CG39 1038 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 HMGB2P26583 209 aaKnown RBP9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 MCM10Q7L590 875 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 MIS18AQ9NYP9 233 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 COLQQ9Y215 455 aaPredicted RBP9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
PRPF40B-214ENST00000551320 SBF1O95248 1867 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 COL3A1P02461 1466 aaPredicted RBP9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 POTECB2RU33 542 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 EIF5P55010 431 aaKnown RBP9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 TTC5Q8N0Z6 440 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 CLSPNQ9HAW4 1339 aa9.23□□□□□ -0.93
PRPF40B-214ENST00000551320 MRC1P22897 1456 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 H0YIN7 160 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 PRKAR2BP31323 418 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 TEFQ10587 303 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 PRR5LQ6MZQ0 368 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 ZNF790Q6PG37 636 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 NGEFQ8N5V2 710 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 TTLL6Q8N841 843 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 RBM46Q8TBY0 533 aaKnown RBP9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 ZNF428Q96B54 188 aa9.22□□□□□ -0.93
PRPF40B-214ENST00000551320 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.93
PRPF40B-214ENST00000551320 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.93
PRPF40B-214ENST00000551320 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 C7P10643 843 aa9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 KLRG1Q96E93 195 aa9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.94
PRPF40B-214ENST00000551320 WDR90Q96KV7 1748 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms