RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 IBSPP21815 317 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 TSHZ3Q63HK5 1081 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 MICALCLQ6ZW33 695 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 ZSWIM4Q9H7M6 989 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 IVLP07476 585 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 TCEAL9Q9UHQ7 104 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 CCDC61Q9Y6R9 512 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 DACT1Q9NYF0 836 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 DENND4BO75064 1496 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 CPLX3Q8WVH0 158 aa18.34■□□□□ 0.53
RBFOX1-212ENST00000550418 PTGS1P23219 599 aa18.33■□□□□ 0.53
RBFOX1-212ENST00000550418 MNAT1P51948 309 aa18.33■□□□□ 0.53
RBFOX1-212ENST00000550418 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.53
RBFOX1-212ENST00000550418 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 ZNF445P59923 1031 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 TAF4BQ92750 862 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 KDM5BQ9UGL1 1544 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 F13A1P00488 732 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 TUBB4AP04350 444 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 ZSCAN25Q6NSZ9 544 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.52
RBFOX1-212ENST00000550418 SPA17Q15506 151 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 RNF187Q5TA31 235 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 CTR9Q6PD62 1173 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 CNNM3Q8NE01 707 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 ESYT1Q9BSJ8 1104 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 PRM3Q9NNZ6 103 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 FBLN1P23142 703 aa18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 SRRTQ9BXP5 876 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-212ENST00000550418 PDE1AP54750 535 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 TYRO3Q06418 890 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 DNAJC25Q9H1X3 360 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 DNM1Q05193 864 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
RBFOX1-212ENST00000550418 PBRM1Q86U86 1689 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 NEFHP12036 1026 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 SCAF11Q99590 1463 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 EVI5LQ96CN4 794 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 MCM6Q14566 821 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 ENOX2Q16206 610 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 NME9Q86XW9 330 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 ANKRD44Q8N8A2 993 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 MBIPQ9NS73 344 aa18.3■□□□□ 0.52
RBFOX1-212ENST00000550418 FAM135AQ9P2D6 1515 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 RSPH14Q9UHP6 348 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 ITSN2Q9NZM3 1697 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 CCDC8Q9H0W5 538 aaPredicted RBP18.29■□□□□ 0.52
RBFOX1-212ENST00000550418 NUP88Q99567 741 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 YEATS4O95619 227 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 MYL6BP14649 208 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 SYCP1Q15431 976 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 PZPP20742 1482 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
RBFOX1-212ENST00000550418 FLIIQ13045 1269 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 TESK2Q96S53 571 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 NSD2O96028 1365 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 CAPN2P17655 700 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 UBASH3AP57075 661 aa18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
RBFOX1-212ENST00000550418 PRAG1Q86YV5 1406 aa18.27■□□□□ 0.51
RBFOX1-212ENST00000550418 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.51
RBFOX1-212ENST00000550418 STRN4Q9NRL3 753 aa18.27■□□□□ 0.51
RBFOX1-212ENST00000550418 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.51
RBFOX1-212ENST00000550418 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 GABPB1Q06547 395 aaPredicted RBP18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 ISM2Q6H9L7 571 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 USP26Q9BXU7 913 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 LUZP1Q86V48 1076 aa18.26■□□□□ 0.51
RBFOX1-212ENST00000550418 MEIS3Q99687 375 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms