RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 PIBF1Q8WXW3 757 aa11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 DBF4Q9UBU7 674 aaPredicted RBP11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 ANKRD20A12PQ8NF67 263 aa11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 SOS1Q07889 1333 aaPredicted RBP11.99□□□□□ -0.49
SMARCC2-209ENST00000550164 JMYQ8N9B5 988 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 NPATQ14207 1427 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 URI1O94763 535 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 IPO7O95373 1038 aaKnown RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.98□□□□□ -0.496e-6■■□□□ 13.3
SMARCC2-209ENST00000550164 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 TRERF1Q96PN7 1200 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 YTHDC2Q9H6S0 1430 aaKnown RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 SKILP12757 684 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 BRF1Q92994 677 aa11.98□□□□□ -0.49
SMARCC2-209ENST00000550164 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 ERICH2A1L162 156 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 ISM2Q6H9L7 571 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 CCDC85AQ96PX6 553 aaPredicted RBP11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 MYD88Q99836 296 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 STX1AQ16623 288 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 ABCA8O94911 1581 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 TTC37Q6PGP7 1564 aa11.97□□□□□ -0.49
SMARCC2-209ENST00000550164 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 CTAGE5O15320 804 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 SKIDA1Q1XH10 827 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 TMC6Q7Z403 805 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 NSFL1CQ9UNZ2 370 aaKnown RBP11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 PAXBP1Q9Y5B6 917 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 ATP7AQ04656 1500 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 TTC39AQ5SRH9 613 aa11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
SMARCC2-209ENST00000550164 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 SMTNL1A8MU46 457 aa11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 POLR3GO15318 223 aaPredicted RBP11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 NEMFO60524 1076 aa11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 C8orf76Q96K31 380 aa11.96□□□□□ -0.5
SMARCC2-209ENST00000550164 CDC42BPAQ5VT25 1732 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 POLR3DP05423 398 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 EYA1Q99502 592 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 SGSM2O43147 1006 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 CREB3L3Q68CJ9 461 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 SMAP1Q8IYB5 467 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 RBM33Q96EV2 1170 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 SNW1Q13573 536 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 CEP126Q9P2H0 1117 aa11.95□□□□□ -0.5
SMARCC2-209ENST00000550164 CBFA2T2O43439 604 aa11.94□□□□□ -0.5
SMARCC2-209ENST00000550164 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.56e-9■■■■□ 23
SMARCC2-209ENST00000550164 VPS53Q5VIR6 699 aa11.94□□□□□ -0.5
SMARCC2-209ENST00000550164 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
SMARCC2-209ENST00000550164 DHX8Q14562 1220 aaKnown RBP11.94□□□□□ -0.5
SMARCC2-209ENST00000550164 CCDC70Q6NSX1 233 aa11.94□□□□□ -0.5
SMARCC2-209ENST00000550164 CAVIN2O95810 425 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 TATP17735 454 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 HSPA4P34932 840 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 RUFY3Q7L099 469 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 TRPM2O94759 1503 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 MAP3K19Q56UN5 1328 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 RAD50Q92878 1312 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 IBTKQ9P2D0 1353 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 GOLIM4O00461 696 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 KIF2CQ99661 725 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 CTNNA3Q9UI47 895 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 GSDMDP57764 484 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 PPFIBP1Q86W92 1011 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 ACBD3Q9H3P7 528 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 HMG20BQ9P0W2 317 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
SMARCC2-209ENST00000550164 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 HAND2P61296 217 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 Q6ZUG5 572 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 KRT222Q8N1A0 295 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 ZSCAN16Q9H4T2 348 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 IFIT1P09914 478 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 IMMTQ16891 758 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-209ENST00000550164 UBE3BQ7Z3V4 1068 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms