RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 BICC1Q9H694 974 aaKnown RBP23.57■■□□□ 1.36
BRF1-215ENST00000549655 STAP2Q9UGK3 403 aa23.57■■□□□ 1.36
BRF1-215ENST00000549655 ARFGEF2Q9Y6D5 1785 aa23.57■■□□□ 1.36
BRF1-215ENST00000549655 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
BRF1-215ENST00000549655 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
BRF1-215ENST00000549655 EIF5BO60841 1220 aaKnown RBP23.56■■□□□ 1.36
BRF1-215ENST00000549655 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
BRF1-215ENST00000549655 ASAP1Q9ULH1 1129 aa23.56■■□□□ 1.36
BRF1-215ENST00000549655 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
BRF1-215ENST00000549655 ITGB4P16144 1822 aa23.55■■□□□ 1.36
BRF1-215ENST00000549655 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
BRF1-215ENST00000549655 WNK3Q9BYP7 1800 aa23.54■■□□□ 1.36
BRF1-215ENST00000549655 NUTM1Q86Y26 1132 aa23.54■■□□□ 1.36
BRF1-215ENST00000549655 TBC1D2Q9BYX2 928 aa23.54■■□□□ 1.36
BRF1-215ENST00000549655 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
BRF1-215ENST00000549655 AFDNP55196 1824 aaKnown RBP23.53■■□□□ 1.36
BRF1-215ENST00000549655 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
BRF1-215ENST00000549655 AOX1Q06278 1338 aa23.53■■□□□ 1.36
BRF1-215ENST00000549655 SPATA31A1Q5TZJ5 1347 aa23.53■■□□□ 1.36
BRF1-215ENST00000549655 ATP5J2-PTCD1G3V325 749 aa23.53■■□□□ 1.36
BRF1-215ENST00000549655 TTLL7Q6ZT98 887 aa23.53■■□□□ 1.36
BRF1-215ENST00000549655 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
BRF1-215ENST00000549655 VSIG10Q8N0Z9 540 aa23.52■■□□□ 1.36
BRF1-215ENST00000549655 CDCA7Q9BWT1 371 aaPredicted RBP23.52■■□□□ 1.36
BRF1-215ENST00000549655 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
BRF1-215ENST00000549655 KAT6BQ8WYB5 2073 aa23.51■■□□□ 1.35
BRF1-215ENST00000549655 LRP6O75581 1613 aa23.51■■□□□ 1.35
BRF1-215ENST00000549655 NBR1Q14596 966 aa23.51■■□□□ 1.35
BRF1-215ENST00000549655 THRAP3Q9Y2W1 955 aaKnown RBP23.51■■□□□ 1.35
BRF1-215ENST00000549655 BCL9O00512 1426 aa23.51■■□□□ 1.35
BRF1-215ENST00000549655 TEX13AQ9BXU3 409 aaPredicted RBP23.51■■□□□ 1.35
BRF1-215ENST00000549655 EPHA10Q5JZY3 1008 aa23.5■■□□□ 1.35
BRF1-215ENST00000549655 ERC1Q8IUD2 1116 aa23.5■■□□□ 1.35
BRF1-215ENST00000549655 JARID2Q92833 1246 aaPredicted RBP23.5■■□□□ 1.35
BRF1-215ENST00000549655 A0A087WZG4 1122 aa23.49■■□□□ 1.35
BRF1-215ENST00000549655 UBAP1LF5GYI3 381 aa23.49■■□□□ 1.35
BRF1-215ENST00000549655 UBE3BQ7Z3V4 1068 aa23.49■■□□□ 1.35
BRF1-215ENST00000549655 DNAJC10Q8IXB1 793 aa23.49■■□□□ 1.35
BRF1-215ENST00000549655 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
BRF1-215ENST00000549655 NUP188Q5SRE5 1749 aa23.48■■□□□ 1.35
BRF1-215ENST00000549655 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
BRF1-215ENST00000549655 SYTL4Q96C24 671 aaPredicted RBP23.48■■□□□ 1.35
BRF1-215ENST00000549655 CLASRPQ8N2M8 674 aaKnown RBP23.47■■□□□ 1.35
BRF1-215ENST00000549655 RILPL2Q969X0 211 aa23.47■■□□□ 1.35
BRF1-215ENST00000549655 KIF2CQ99661 725 aa23.47■■□□□ 1.35
BRF1-215ENST00000549655 ZBTB3Q9H5J0 574 aa23.47■■□□□ 1.35
BRF1-215ENST00000549655 DDB1Q16531 1140 aa23.47■■□□□ 1.35
BRF1-215ENST00000549655 COL15A1P39059 1388 aa23.47■■□□□ 1.35
BRF1-215ENST00000549655 SPATA31A5Q5VU36 1347 aa23.46■■□□□ 1.35
BRF1-215ENST00000549655 SPATA31A7Q8IWB4 1347 aa23.46■■□□□ 1.35
BRF1-215ENST00000549655 STARD3NLO95772 234 aa23.46■■□□□ 1.35
BRF1-215ENST00000549655 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
BRF1-215ENST00000549655 PI4K2BQ8TCG2 481 aa23.46■■□□□ 1.35
BRF1-215ENST00000549655 USP26Q9BXU7 913 aa23.46■■□□□ 1.35
BRF1-215ENST00000549655 PRIM1P49642 420 aaKnown RBP23.45■■□□□ 1.35
BRF1-215ENST00000549655 CASP7P55210 303 aa23.45■■□□□ 1.35
BRF1-215ENST00000549655 NWD2Q9ULI1 1742 aa23.45■■□□□ 1.34
BRF1-215ENST00000549655 SLIT2O94813 1529 aa23.45■■□□□ 1.34
BRF1-215ENST00000549655 ERC2O15083 957 aa23.45■■□□□ 1.34
BRF1-215ENST00000549655 REC8O95072 547 aa23.44■■□□□ 1.34
BRF1-215ENST00000549655 UNC5CLQ8IV45 518 aa23.44■■□□□ 1.34
BRF1-215ENST00000549655 CWC25Q9NXE8 425 aaPredicted RBP23.44■■□□□ 1.34
BRF1-215ENST00000549655 CCDC9Q9Y3X0 531 aaKnown RBP23.44■■□□□ 1.34
BRF1-215ENST00000549655 USP42Q9H9J4 1324 aaKnown RBP23.44■■□□□ 1.34
BRF1-215ENST00000549655 H7C1W4 665 aa23.43■■□□□ 1.34
BRF1-215ENST00000549655 RABL6Q3YEC7 729 aaPredicted RBP23.43■■□□□ 1.34
BRF1-215ENST00000549655 ZNF330Q9Y3S2 320 aaPredicted RBP23.43■■□□□ 1.34
BRF1-215ENST00000549655 SASH1O94885 1247 aa23.43■■□□□ 1.34
BRF1-215ENST00000549655 HSCBQ8IWL3 235 aa23.43■■□□□ 1.34
BRF1-215ENST00000549655 KLHDC4Q8TBB5 520 aa23.43■■□□□ 1.34
BRF1-215ENST00000549655 SIL1Q9H173 461 aa23.43■■□□□ 1.34
BRF1-215ENST00000549655 CCDC191Q8NCU4 936 aa23.42■■□□□ 1.34
BRF1-215ENST00000549655 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
BRF1-215ENST00000549655 TTC41PQ6P2S7 1318 aa23.42■■□□□ 1.34
BRF1-215ENST00000549655 DOT1LQ8TEK3 1739 aa23.42■■□□□ 1.34
BRF1-215ENST00000549655 CHMLP26374 656 aa23.41■■□□□ 1.34
BRF1-215ENST00000549655 SNX21Q969T3 373 aa23.41■■□□□ 1.34
BRF1-215ENST00000549655 IFIT2P09913 472 aaKnown RBP23.41■■□□□ 1.34
BRF1-215ENST00000549655 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
BRF1-215ENST00000549655 RFX5P48382 616 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 AACSQ86V21 672 aa23.4■■□□□ 1.34
BRF1-215ENST00000549655 ESYT1Q9BSJ8 1104 aa23.4■■□□□ 1.34
BRF1-215ENST00000549655 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 COPRSQ9NQ92 184 aa23.4■■□□□ 1.34
BRF1-215ENST00000549655 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 CYP19A1P11511 503 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.4■■□□□ 1.34
BRF1-215ENST00000549655 GLRX3O76003 335 aaKnown RBP23.39■■□□□ 1.33
BRF1-215ENST00000549655 KIF6Q6ZMV9 814 aa23.39■■□□□ 1.33
BRF1-215ENST00000549655 GPATCH3Q96I76 525 aa23.39■■□□□ 1.33
BRF1-215ENST00000549655 ECHDC1Q9NTX5 307 aa23.39■■□□□ 1.33
BRF1-215ENST00000549655 FOXO4P98177 505 aa23.38■■□□□ 1.33
BRF1-215ENST00000549655 TCIRG1Q13488 830 aa23.38■■□□□ 1.33
BRF1-215ENST00000549655 RTL5Q5HYW3 569 aaPredicted RBP23.38■■□□□ 1.33
BRF1-215ENST00000549655 TJP1Q07157 1748 aa23.38■■□□□ 1.33
BRF1-215ENST00000549655 PTPN12Q05209 780 aaKnown RBP23.38■■□□□ 1.33
BRF1-215ENST00000549655 LMBR1LQ6UX01 489 aa23.38■■□□□ 1.33
BRF1-215ENST00000549655 EAF2Q96CJ1 260 aaPredicted RBP23.38■■□□□ 1.33
BRF1-215ENST00000549655 ISCA1Q9BUE6 129 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms