RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 TFCP2L1Q9NZI6 479 aa20.09■□□□□ 0.81
ARHGEF28-214ENST00000545377 KIF20AO95235 890 aa20.09■□□□□ 0.81
ARHGEF28-214ENST00000545377 FGFR1OPO95684 399 aaKnown RBP20.09■□□□□ 0.81
ARHGEF28-214ENST00000545377 CETN1Q12798 172 aa20.09■□□□□ 0.81
ARHGEF28-214ENST00000545377 TEX13AQ9BXU3 409 aaPredicted RBP20.09■□□□□ 0.81
ARHGEF28-214ENST00000545377 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.81
ARHGEF28-214ENST00000545377 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
ARHGEF28-214ENST00000545377 IQSEC3Q9UPP2 1182 aaPredicted RBP20.08■□□□□ 0.8
ARHGEF28-214ENST00000545377 KIF21BO75037 1637 aa20.08■□□□□ 0.8
ARHGEF28-214ENST00000545377 SSX2IPQ9Y2D8 614 aa20.08■□□□□ 0.8
ARHGEF28-214ENST00000545377 HAND2P61296 217 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 CCDC12Q8WUD4 166 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 EIF3JO75822 258 aaKnown RBP20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 PRKCSHP14314 528 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 UBE4AQ14139 1066 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 CCDC40Q4G0X9 1142 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 TMEM67Q5HYA8 995 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 LMAN1P49257 510 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 STAMBPO95630 424 aa20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 MAP2K1Q02750 393 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF28-214ENST00000545377 GOLGA6L10A0A0M3HER8 536 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 KIF5BP33176 963 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 UTP14AQ9BVJ6 771 aaKnown RBP20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 GSTO1P78417 241 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 STX8Q9UNK0 236 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 CD109Q6YHK3 1445 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 DBF4Q9UBU7 674 aaPredicted RBP20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 TMX1Q9H3N1 280 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
ARHGEF28-214ENST00000545377 PPFIA3O75145 1194 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 SYNCQ9H7C4 482 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 LUZP1Q86V48 1076 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 TCP11L1Q9NUJ3 509 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 MTIF2P46199 727 aaKnown RBP20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 NUP88Q99567 741 aaPredicted RBP20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 RBM10P98175 930 aaKnown RBP20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 CRNKL1Q9BZJ0 848 aaKnown RBP20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 ZNF408Q9H9D4 720 aa20.05■□□□□ 0.8
ARHGEF28-214ENST00000545377 MAP3K11Q16584 847 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 CCDC174Q6PII3 467 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 LRSAM1Q6UWE0 723 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 TTC21AQ8NDW8 1320 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 MSH6P52701 1360 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 LMOD1P29536 600 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 MFSD6Q6ZSS7 791 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 JDP2Q8WYK2 163 aa20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 BCCIPQ9P287 314 aaKnown RBP eCLIP20.04■□□□□ 0.8
ARHGEF28-214ENST00000545377 NESP48681 1621 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 PRPF4BQ13523 1007 aaKnown RBP20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 PANK2Q9BZ23 570 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 DPH6Q7L8W6 267 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 CNNM3Q8NE01 707 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 RIMBP2O15034 1052 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 IFFO1Q0D2I5 559 aa20.03■□□□□ 0.8
ARHGEF28-214ENST00000545377 TMCO5BA8MYB1 307 aa20.02■□□□□ 0.8
ARHGEF28-214ENST00000545377 IFT140Q96RY7 1462 aa20.02■□□□□ 0.8
ARHGEF28-214ENST00000545377 ARL1P40616 181 aaPredicted RBP20.02■□□□□ 0.8
ARHGEF28-214ENST00000545377 TAF12Q16514 161 aa20.02■□□□□ 0.8
ARHGEF28-214ENST00000545377 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
ARHGEF28-214ENST00000545377 PHACTR2O75167 634 aa20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 TBCAO75347 108 aaKnown RBP20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 HMGB1P09429 215 aaKnown RBP20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 WASLO00401 505 aaPredicted RBP20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 AMPD3Q01432 767 aa20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 FAM212AQ96EL1 285 aa20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 FERMT1Q9BQL6 677 aa20.01■□□□□ 0.79
ARHGEF28-214ENST00000545377 SLC26A6Q9BXS9 759 aa20■□□□□ 0.79
ARHGEF28-214ENST00000545377 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 DDB1Q16531 1140 aa19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 NLRP3Q96P20 1036 aa19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 NIP7Q9Y221 180 aaKnown RBP eCLIP19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 CYP7A1P22680 504 aa19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 ZCRB1Q8TBF4 217 aaKnown RBP19.99■□□□□ 0.79
ARHGEF28-214ENST00000545377 STX6O43752 255 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 NOP2P46087 812 aaKnown RBP19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 OTUD6BQ8N6M0 293 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 PUS7Q96PZ0 661 aaKnown RBP19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 RGS22Q8NE09 1264 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 ANXA1P04083 346 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 RFX1P22670 979 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 IARSP41252 1262 aaKnown RBP19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 TSNARE1Q96NA8 513 aa19.98■□□□□ 0.79
ARHGEF28-214ENST00000545377 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
ARHGEF28-214ENST00000545377 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
ARHGEF28-214ENST00000545377 SNRPA1P09661 255 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms