RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 NFAT5O94916 1531 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 FAM177BA6PVY3 158 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 POLA2Q14181 598 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 HSP90AB3PQ58FF7 597 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 BRINP3Q76B58 766 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 SYNE4Q8N205 404 aa4.58□□□□□ -1.68
BRCA2-206ENST00000544455 CASTP20810 708 aaKnown RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 FOSBP53539 338 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 ANKRD13DQ6ZTN6 518 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 OSBPL3Q9H4L5 887 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 XRN1Q8IZH2 1706 aaKnown RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 FER1L4A9Z1Z3 1794 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 A0A0G2JLW4 131 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 DDX11L8A8MPP1 907 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 LARP1Q6PKG0 1096 aaKnown RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 KDM6AO15550 1401 aaPredicted RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 GRM8O00222 908 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 NMIQ13287 307 aaPredicted RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 NECAB1Q8N987 351 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 GBP4Q96PP9 640 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 GRPEL1Q9HAV7 217 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 DIAPH3Q9NSV4 1193 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 CCDC83Q8IWF9 413 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 RGPD1P0DJD0 1748 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 A0A087WZG4 1122 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 AK2P54819 239 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 CNTROBQ8N137 903 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 PRDM11Q9NQV5 511 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 GADD45BO75293 160 aaPredicted RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 CLASRPQ8N2M8 674 aaKnown RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 EIF5BO60841 1220 aaKnown RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 FAM173BQ6P4H8 233 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 ZNF589Q86UQ0 364 aaPredicted RBP4.57□□□□□ -1.68
BRCA2-206ENST00000544455 GPT2Q8TD30 523 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 FSD1Q9BTV5 496 aa4.57□□□□□ -1.68
BRCA2-206ENST00000544455 A0A0D9SFI3 127 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NEURL1BA8MQ27 555 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 KCNJ4P48050 445 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 RNF214Q8ND24 703 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 KDM4AO75164 1064 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 G3BP1Q13283 466 aaKnown RBP eCLIP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 JAKMIP1Q96N16 626 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LSG1Q9H089 658 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 MST1RQ04912 1400 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LMBR1LQ6UX01 489 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 DDX21Q9NR30 783 aaKnown RBP eCLIP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 GCKRQ14397 625 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 DDX46Q7L014 1031 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 DBNDD2Q9BQY9 259 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 STAP2Q9UGK3 403 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NEXNQ0ZGT2 675 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 SMIM5Q71RC9 77 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 PUS3Q9BZE2 481 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 SGSM2O43147 1006 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 MCCP23508 829 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 ZCRB1Q8TBF4 217 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LMBRD1Q9NUN5 540 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 DDX58O95786 925 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 EVA1CP58658 441 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LRRC24Q50LG9 513 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 FERMT3Q86UX7 667 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LRRC2Q9BYS8 371 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NBPF26B4DH59 902 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NBPF14Q5TI25 921 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NBPF10Q6P3W6 841 aaKnown RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 RUFY3Q7L099 469 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 NBPF15Q8N660 670 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 LINS1Q8NG48 757 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 RGPD8O14715 1765 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 MED1Q15648 1581 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-206ENST00000544455 SYCE3A1L190 88 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 ECHDC1Q9NTX5 307 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 HYPKQ9NX55 129 aa4.56□□□□□ -1.68
BRCA2-206ENST00000544455 RAB11FIP3O75154 756 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 ZSCAN23Q3MJ62 389 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 SNRKQ9NRH2 765 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 CNPY2Q9Y2B0 182 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 ERBB4Q15303 1308 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 GOLGA6L22H0YM25 854 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 KIAA1211Q6ZU35 1233 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 CHST3Q7LGC8 479 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 FMNL2Q96PY5 1086 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 FMN2Q9NZ56 1722 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 TMEM63CQ9P1W3 806 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 TIMM10P62072 90 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 PTPN12Q05209 780 aaKnown RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 PI16Q6UXB8 463 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 RAB11FIP4Q86YS3 637 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 DCAF5Q96JK2 942 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 METTL22Q9BUU2 404 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 ASAP1Q9ULH1 1129 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 VPS37CA5D8V6 355 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 GJB2P29033 226 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 KCNQ4P56696 695 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 L1TD1Q5T7N2 865 aaKnown RBP4.55□□□□□ -1.68
BRCA2-206ENST00000544455 VPS53Q5VIR6 699 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 SPATA31A3Q5VYP0 1347 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 GPTP24298 496 aa4.55□□□□□ -1.68
BRCA2-206ENST00000544455 NAP1L2Q9ULW6 460 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms