RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 KIF5CO60282 957 aa22.56■■□□□ 1.2
SUDS3-204ENST00000543473 CCDC69A6NI79 296 aa22.56■■□□□ 1.2
SUDS3-204ENST00000543473 TAF7Q15545 349 aaPredicted RBP22.56■■□□□ 1.2
SUDS3-204ENST00000543473 IQCEQ6IPM2 695 aa22.56■■□□□ 1.2
SUDS3-204ENST00000543473 SMAP1Q8IYB5 467 aaPredicted RBP22.55■■□□□ 1.2
SUDS3-204ENST00000543473 MYO6Q9UM54 1294 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 TRIM34Q9BYJ4 488 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 SKILP12757 684 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 C8orf76Q96K31 380 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 ECHDC1Q9NTX5 307 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
SUDS3-204ENST00000543473 ANO6Q4KMQ2 910 aa22.54■■□□□ 1.2
SUDS3-204ENST00000543473 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
SUDS3-204ENST00000543473 CALRP27797 417 aaKnown RBP22.54■■□□□ 1.2
SUDS3-204ENST00000543473 ATP7AQ04656 1500 aa22.54■■□□□ 1.2
SUDS3-204ENST00000543473 CCDC8Q9H0W5 538 aaPredicted RBP22.54■■□□□ 1.2
SUDS3-204ENST00000543473 AMOTQ4VCS5 1084 aa22.54■■□□□ 1.2
SUDS3-204ENST00000543473 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
SUDS3-204ENST00000543473 BIN1O00499 593 aa22.53■■□□□ 1.2
SUDS3-204ENST00000543473 SLC3A2P08195 630 aaKnown RBP22.53■■□□□ 1.2
SUDS3-204ENST00000543473 TTC21BQ7Z4L5 1316 aa22.53■■□□□ 1.2
SUDS3-204ENST00000543473 MRPL50Q8N5N7 158 aaKnown RBP22.53■■□□□ 1.2
SUDS3-204ENST00000543473 IGSF3O75054 1194 aa22.53■■□□□ 1.2
SUDS3-204ENST00000543473 CCDC148Q8NFR7 591 aa22.53■■□□□ 1.2
SUDS3-204ENST00000543473 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
SUDS3-204ENST00000543473 CADPS2Q86UW7 1296 aa22.53■■□□□ 1.2
SUDS3-204ENST00000543473 IMMTQ16891 758 aaKnown RBP22.52■■□□□ 1.2
SUDS3-204ENST00000543473 CCAR1Q8IX12 1150 aaKnown RBP22.52■■□□□ 1.2
SUDS3-204ENST00000543473 NUP133Q8WUM0 1156 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 EVI5LQ96CN4 794 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 CENPHQ9H3R5 247 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 LUC7LQ9NQ29 371 aaKnown RBP22.52■■□□□ 1.2
SUDS3-204ENST00000543473 CEP126Q9P2H0 1117 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 F13A1P00488 732 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 HMGB1P09429 215 aaKnown RBP22.52■■□□□ 1.2
SUDS3-204ENST00000543473 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 DNM1Q05193 864 aaKnown RBP22.52■■□□□ 1.2
SUDS3-204ENST00000543473 HSP90AB2PQ58FF8 381 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 NECAB1Q8N987 351 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 DCTPP1Q9H773 170 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 DACT1Q9NYF0 836 aa22.52■■□□□ 1.2
SUDS3-204ENST00000543473 TERF1P54274 439 aa22.52■■□□□ 1.19
SUDS3-204ENST00000543473 ZNF445P59923 1031 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 USP26Q9BXU7 913 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 PPIP5K1Q6PFW1 1433 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 CT47A1Q5JQC4 288 aaPredicted RBP22.51■■□□□ 1.19
SUDS3-204ENST00000543473 KIAA1328Q86T90 577 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 PLEKHM2Q8IWE5 1019 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 NACAP1Q9BZK3 213 aa22.51■■□□□ 1.19
SUDS3-204ENST00000543473 CNNM1Q9NRU3 951 aa22.5■■□□□ 1.19
SUDS3-204ENST00000543473 CCDC150Q8NCX0 1101 aa22.5■■□□□ 1.19
SUDS3-204ENST00000543473 DNAAF4Q8WXU2 420 aa22.5■■□□□ 1.19
SUDS3-204ENST00000543473 LMAN1P49257 510 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 MAP9Q49MG5 647 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 PPP1R42Q7Z4L9 355 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 TMX1Q9H3N1 280 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 CCT2P78371 535 aaKnown RBP22.49■■□□□ 1.19
SUDS3-204ENST00000543473 ZSCAN25Q6NSZ9 544 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 INTS4Q96HW7 963 aaKnown RBP22.49■■□□□ 1.19
SUDS3-204ENST00000543473 KLHL10Q6JEL2 608 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.49■■□□□ 1.19
SUDS3-204ENST00000543473 V9GYY5 206 aaPredicted RBP22.49■■□□□ 1.19
SUDS3-204ENST00000543473 CDK5RAP3Q96JB5 506 aa22.49■■□□□ 1.19
SUDS3-204ENST00000543473 ZRANB1Q9UGI0 708 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 PTGS1P23219 599 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 CCDC57Q2TAC2 916 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 TXLNBQ8N3L3 684 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 WASF1Q92558 559 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
SUDS3-204ENST00000543473 CARD14Q9BXL6 1004 aa22.48■■□□□ 1.19
SUDS3-204ENST00000543473 FEZ1Q99689 392 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 DNAJC25Q9H1X3 360 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 GOLGA6L9A6NEM1 432 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 ADAMTS2O95450 1211 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 GNG11P61952 73 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 TYRO3Q06418 890 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 EIF2AK4Q9P2K8 1649 aaKnown RBP22.47■■□□□ 1.19
SUDS3-204ENST00000543473 SLU7O95391 586 aaKnown RBP22.47■■□□□ 1.19
SUDS3-204ENST00000543473 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 BBXQ8WY36 941 aaPredicted RBP22.47■■□□□ 1.19
SUDS3-204ENST00000543473 ZSCAN16Q9H4T2 348 aaPredicted RBP22.47■■□□□ 1.19
SUDS3-204ENST00000543473 ODF2Q5BJF6 829 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 RHPN1Q8TCX5 695 aa22.47■■□□□ 1.19
SUDS3-204ENST00000543473 ERLIN2O94905 339 aa22.46■■□□□ 1.19
SUDS3-204ENST00000543473 ZMYM4Q5VZL5 1548 aa22.46■■□□□ 1.19
SUDS3-204ENST00000543473 CNNM3Q8NE01 707 aa22.46■■□□□ 1.19
SUDS3-204ENST00000543473 CPLX3Q8WVH0 158 aa22.46■■□□□ 1.19
SUDS3-204ENST00000543473 TTC21AQ8NDW8 1320 aa22.45■■□□□ 1.19
SUDS3-204ENST00000543473 VAMP4O75379 141 aa22.45■■□□□ 1.18
SUDS3-204ENST00000543473 CHRNA2Q15822 529 aa22.45■■□□□ 1.18
SUDS3-204ENST00000543473 PUS7Q96PZ0 661 aaKnown RBP22.45■■□□□ 1.18
SUDS3-204ENST00000543473 ATP10AO60312 1499 aa22.45■■□□□ 1.18
SUDS3-204ENST00000543473 DNAI1Q9UI46 699 aa22.45■■□□□ 1.18
SUDS3-204ENST00000543473 CEP131Q9UPN4 1083 aa22.45■■□□□ 1.18
SUDS3-204ENST00000543473 OGFRQ9NZT2 677 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 POTEB2H3BUK9 544 aa22.44■■□□□ 1.18
SUDS3-204ENST00000543473 ZNF397Q8NF99 534 aaPredicted RBP22.44■■□□□ 1.18
SUDS3-204ENST00000543473 NEK1Q96PY6 1258 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms