RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ZSCAN31Q96LW9 406 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 MAGEC2Q9UBF1 373 aaPredicted RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 PTPRKQ15262 1439 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 YTHDC2Q9H6S0 1430 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 CCDC196A0A1B0GTZ2 297 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 HLA-DOAP06340 250 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 DZIP3Q86Y13 1208 aaKnown RBP8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 CABP5Q9NP86 173 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 CHPF2Q9P2E5 772 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 SHANK2Q9UPX8 1470 aa8.1□□□□□ -1.11
SRGAP1-206ENST00000543397 RFX1P22670 979 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 ME1P48163 572 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 TNIP1Q15025 636 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 HDAC9Q9UKV0 1011 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 IL16Q14005 1332 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 MBD3O95983 291 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 STIM1Q13586 685 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 POLKQ9UBT6 870 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 ABCC1P33527 1531 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 PRAG1Q86YV5 1406 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 RALGAPBQ86X10 1494 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 NEO1Q92859 1461 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 SYCP1Q15431 976 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 DISP1Q96F81 1524 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 FILIP1LQ4L180 1135 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 IP6K1Q92551 441 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 ATP7AQ04656 1500 aa8.09□□□□□ -1.11
SRGAP1-206ENST00000543397 ZNF213O14771 459 aa8.09□□□□□ -1.12
SRGAP1-206ENST00000543397 JDP2Q8WYK2 163 aa8.09□□□□□ -1.12
SRGAP1-206ENST00000543397 SNRKQ9NRH2 765 aa8.09□□□□□ -1.12
SRGAP1-206ENST00000543397 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.12
SRGAP1-206ENST00000543397 KRT85P78386 507 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 JARID2Q92833 1246 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 ECHDC1Q9NTX5 307 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 UQCRFS1P1P0C7P4 283 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 TRIM27P14373 513 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 TMED8Q6PL24 325 aaPredicted RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 PDCL3Q9H2J4 239 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 WDR33Q9C0J8 1336 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 CASTP20810 708 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 CHMP4BP1P59074 171 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 GOLIM4O00461 696 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 GNPATO15228 680 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 PDILTQ8N807 584 aa8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 ZC3H12CQ9C0D7 883 aaKnown RBP8.08□□□□□ -1.12
SRGAP1-206ENST00000543397 MAP3K19Q56UN5 1328 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 HOXC9P31274 260 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 CCNL1Q9UK58 526 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 ARHGEF10O15013 1369 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 GSTO1P78417 241 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 MTHFSDQ2M296 383 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 TRAPPC3LQ5T215 181 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 ZGPATQ8N5A5 531 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 CUL5Q93034 780 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 EYA1Q99502 592 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 USP21Q9UK80 565 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 TNNT3P45378 269 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 PDE4BQ07343 736 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 MAPK8IP2Q13387 824 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 FAM98CQ17RN3 349 aaKnown RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 KSR2Q6VAB6 950 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 SCLT1Q96NL6 688 aa8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
SRGAP1-206ENST00000543397 K7ELQ4 463 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 ATP2B3Q16720 1220 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 AXDND1Q5T1B0 1012 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 NSFL1CQ9UNZ2 370 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 TMEM2Q9UHN6 1383 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 ZFYVE16Q7Z3T8 1539 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 TCOF1Q13428 1488 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 ALDH1L1O75891 902 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 LETM1O95202 739 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 C16orf71Q8IYS4 520 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 GPBP1L1Q9HC44 474 aaPredicted RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 SLC12A7Q9Y666 1083 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 TSPY2A6NKD2 308 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 GRM8O00222 908 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 IFIT3O14879 490 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 NF2P35240 595 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 CCDC173Q0VFZ6 552 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 GRM1Q13255 1194 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 GSE1Q14687 1217 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 LMBR1LQ6UX01 489 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 EVI5LQ96CN4 794 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 DDX11Q96FC9 970 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 ASXL1Q8IXJ9 1541 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 MATR3P43243 847 aaKnown RBP eCLIP8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 PPP4R4Q6NUP7 873 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 ARMCX6Q7L4S7 300 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 DACH1Q9UI36 760 aa8.06□□□□□ -1.12
SRGAP1-206ENST00000543397 MAP3K5Q99683 1374 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms