RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
GNE-206ENST00000543356 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
GNE-206ENST00000543356 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
GNE-206ENST00000543356 ATRNO75882 1429 aa11.62□□□□□ -0.55
GNE-206ENST00000543356 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
GNE-206ENST00000543356 MEX3CQ5U5Q3 659 aaKnown RBP11.62□□□□□ -0.55
GNE-206ENST00000543356 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
GNE-206ENST00000543356 IGKV5-2P06315 115 aa11.61□□□□□ -0.55
GNE-206ENST00000543356 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
GNE-206ENST00000543356 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
GNE-206ENST00000543356 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
GNE-206ENST00000543356 CWF19L2Q2TBE0 894 aaKnown RBP11.61□□□□□ -0.55
GNE-206ENST00000543356 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
GNE-206ENST00000543356 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 GRM8O00222 908 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 STARD3NLO95772 234 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 A1BGP04217 495 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 MTX1Q13505 466 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 POLA2Q14181 598 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 DNAJC10Q8IXB1 793 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
GNE-206ENST00000543356 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
GNE-206ENST00000543356 COL15A1P39059 1388 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 MYD88Q99836 296 aa11.6□□□□□ -0.55
GNE-206ENST00000543356 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
GNE-206ENST00000543356 AFF2P51816 1311 aa11.59□□□□□ -0.55
GNE-206ENST00000543356 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
GNE-206ENST00000543356 GCKRQ14397 625 aa11.59□□□□□ -0.55
GNE-206ENST00000543356 SLC4A9Q96Q91 983 aa11.59□□□□□ -0.55
GNE-206ENST00000543356 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
GNE-206ENST00000543356 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
GNE-206ENST00000543356 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
GNE-206ENST00000543356 TTLL7Q6ZT98 887 aa11.58□□□□□ -0.56
GNE-206ENST00000543356 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
GNE-206ENST00000543356 SMARCC1Q92922 1105 aaPredicted RBP11.57□□□□□ -0.56
GNE-206ENST00000543356 ACSBG1Q96GR2 724 aa11.57□□□□□ -0.56
GNE-206ENST00000543356 GJD4Q96KN9 370 aaPredicted RBP11.57□□□□□ -0.56
GNE-206ENST00000543356 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
GNE-206ENST00000543356 TRPC5Q9UL62 973 aaPredicted RBP11.57□□□□□ -0.56
GNE-206ENST00000543356 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
GNE-206ENST00000543356 SRGAP3O43295 1099 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 BTAF1O14981 1849 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 ONECUT3O60422 494 aaPredicted RBP11.56□□□□□ -0.56
GNE-206ENST00000543356 RAB11FIP3O75154 756 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 EXOC6BQ9Y2D4 811 aa11.56□□□□□ -0.56
GNE-206ENST00000543356 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
GNE-206ENST00000543356 PLEKHM2Q8IWE5 1019 aa11.55□□□□□ -0.56
GNE-206ENST00000543356 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
GNE-206ENST00000543356 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
GNE-206ENST00000543356 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
GNE-206ENST00000543356 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
GNE-206ENST00000543356 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
GNE-206ENST00000543356 TUBGCP6Q96RT7 1819 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 IL6STP40189 918 aaPredicted RBP11.54□□□□□ -0.56
GNE-206ENST00000543356 SIK1P57059 783 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
GNE-206ENST00000543356 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
GNE-206ENST00000543356 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 A0A0G2JS52 829 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
GNE-206ENST00000543356 CASP7P55210 303 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 SALL3Q9BXA9 1300 aa11.54□□□□□ -0.56
GNE-206ENST00000543356 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 KCNQ2O43526 872 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 TRIM28Q13263 835 aaKnown RBP11.53□□□□□ -0.56
GNE-206ENST00000543356 HOMEZQ8IX15 550 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 LY75O60449 1722 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 A0A087WZG4 1122 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 H7C1W4 665 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 APBB1O00213 710 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 SURF6O75683 361 aaKnown RBP11.53□□□□□ -0.56
GNE-206ENST00000543356 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 ANP32AP39687 249 aaKnown RBP11.53□□□□□ -0.56
GNE-206ENST00000543356 TCIRG1Q13488 830 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 RABL6Q3YEC7 729 aaPredicted RBP11.53□□□□□ -0.56
GNE-206ENST00000543356 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
GNE-206ENST00000543356 BCORQ6W2J9 1755 aa11.52□□□□□ -0.56
GNE-206ENST00000543356 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.56
GNE-206ENST00000543356 KIF1BPQ96EK5 621 aa11.52□□□□□ -0.56
GNE-206ENST00000543356 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.56
GNE-206ENST00000543356 NUP98P52948 1817 aa11.52□□□□□ -0.57
GNE-206ENST00000543356 ITPK1Q13572 414 aa11.52□□□□□ -0.57
GNE-206ENST00000543356 HSP90AB3PQ58FF7 597 aa11.52□□□□□ -0.57
GNE-206ENST00000543356 INTS5Q6P9B9 1019 aaKnown RBP11.52□□□□□ -0.57
GNE-206ENST00000543356 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
GNE-206ENST00000543356 ERVV-1B6SEH8 477 aa11.51□□□□□ -0.57
GNE-206ENST00000543356 NBR1Q14596 966 aa11.51□□□□□ -0.57
GNE-206ENST00000543356 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
GNE-206ENST00000543356 ERC1Q8IUD2 1116 aa11.51□□□□□ -0.57
GNE-206ENST00000543356 RHPN1Q8TCX5 695 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms