RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 GDF11O95390 407 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 SEC13P55735 322 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 LAMC2Q13753 1193 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 KANK3Q6NY19 840 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 GAS2L2Q8NHY3 880 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 VRTNQ9H8Y1 702 aa6.87□□□□□ -1.31
LDHB-209ENST00000542765 AVENQ9NQS1 362 aaPredicted RBP6.87□□□□□ -1.31
LDHB-209ENST00000542765 DCDC2BA2VCK2 349 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L15C9J2P7 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L10C9JJH3 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L13C9JLJ4 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L11C9JVI0 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L21D6R901 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L18D6R9N7 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L22D6RA61 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L17D6RBQ6 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L19D6RCP7 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L20D6RJB6 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 IRS1P35568 1242 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 SRPK2P78362 688 aaKnown RBP6.86□□□□□ -1.31
LDHB-209ENST00000542765 USP17L24Q0WX57 530 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 CDCA8Q53HL2 280 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 GALNT6Q8NCL4 622 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 EDARADDQ8WWZ3 215 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 MDFIQ99750 246 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 ARID3AQ99856 593 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
LDHB-209ENST00000542765 GGA1Q9UJY5 639 aa6.86□□□□□ -1.31
LDHB-209ENST00000542765 ATAD2Q6PL18 1390 aa6.85□□□□□ -1.31
LDHB-209ENST00000542765 EPXP11678 715 aa6.85□□□□□ -1.31
LDHB-209ENST00000542765 CD33P20138 364 aa6.85□□□□□ -1.31
LDHB-209ENST00000542765 SNRPNP63162 240 aaKnown RBP6.85□□□□□ -1.31
LDHB-209ENST00000542765 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
LDHB-209ENST00000542765 BEND7Q8N7W2 519 aaPredicted RBP6.85□□□□□ -1.31
LDHB-209ENST00000542765 PBXIP1Q96AQ6 731 aa6.85□□□□□ -1.31
LDHB-209ENST00000542765 KHNYNO15037 678 aaKnown RBP6.84□□□□□ -1.31
LDHB-209ENST00000542765 DPYDQ12882 1025 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 LINC00114Q6XXX2 140 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 LRRC69Q6ZNQ3 347 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 BICDL1Q6ZP65 573 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 ANKMY2Q8IV38 441 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 KCTD17Q8N5Z5 321 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 NEDD1Q8NHV4 660 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 PHACTR1Q9C0D0 580 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 ZNF232Q9UNY5 417 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 HCN4Q9Y3Q4 1203 aa6.84□□□□□ -1.31
LDHB-209ENST00000542765 DNMT3AQ9Y6K1 912 aaPredicted RBP6.84□□□□□ -1.31
LDHB-209ENST00000542765 ITGB2P05107 769 aa6.83□□□□□ -1.32
LDHB-209ENST00000542765 ZNF468Q5VIY5 522 aaPredicted RBP6.83□□□□□ -1.32
LDHB-209ENST00000542765 FCHSD1Q86WN1 690 aa6.83□□□□□ -1.32
LDHB-209ENST00000542765 BTBD6Q96KE9 485 aa6.83□□□□□ -1.32
LDHB-209ENST00000542765 MARK1Q9P0L2 795 aa6.83□□□□□ -1.32
LDHB-209ENST00000542765 NEURL1BA8MQ27 555 aa6.82□□□□□ -1.32
LDHB-209ENST00000542765 PHF20L1A8MW92 1017 aa6.82□□□□□ -1.32
LDHB-209ENST00000542765 PPP1R12BO60237 982 aaPredicted RBP6.82□□□□□ -1.32
LDHB-209ENST00000542765 KCNQ4P56696 695 aa6.82□□□□□ -1.32
LDHB-209ENST00000542765 GRIN2CQ14957 1233 aa6.82□□□□□ -1.32
LDHB-209ENST00000542765 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
LDHB-209ENST00000542765 SUSD3Q96L08 255 aa6.82□□□□□ -1.32
LDHB-209ENST00000542765 IGFBP4P22692 258 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 ADH6P28332 368 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 WEE1P30291 646 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 SFSWAPQ12872 951 aaKnown RBP6.81□□□□□ -1.32
LDHB-209ENST00000542765 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 ZNF280CQ8ND82 737 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 DCAF5Q96JK2 942 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 RBM19Q9Y4C8 960 aaKnown RBP6.81□□□□□ -1.32
LDHB-209ENST00000542765 GJA3Q9Y6H8 435 aa6.81□□□□□ -1.32
LDHB-209ENST00000542765 ATG7O95352 703 aa6.8□□□□□ -1.32
LDHB-209ENST00000542765 DGKGP49619 791 aa6.8□□□□□ -1.32
LDHB-209ENST00000542765 TYRO3Q06418 890 aa6.8□□□□□ -1.32
LDHB-209ENST00000542765 ELOAQ14241 798 aaKnown RBP6.8□□□□□ -1.32
LDHB-209ENST00000542765 HSH2DQ96JZ2 352 aa6.8□□□□□ -1.32
LDHB-209ENST00000542765 DMGDHQ9UI17 866 aaKnown RBP6.8□□□□□ -1.32
LDHB-209ENST00000542765 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
LDHB-209ENST00000542765 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
LDHB-209ENST00000542765 STK32AQ8WU08 396 aa6.79□□□□□ -1.32
LDHB-209ENST00000542765 SLC30A3Q99726 388 aa6.79□□□□□ -1.32
LDHB-209ENST00000542765 ANKIB1Q9P2G1 1089 aa6.79□□□□□ -1.32
LDHB-209ENST00000542765 BCS1LQ9Y276 419 aa6.79□□□□□ -1.32
LDHB-209ENST00000542765 CHMP3Q9Y3E7 222 aa6.79□□□□□ -1.32
LDHB-209ENST00000542765 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 SIN3BO75182 1162 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
LDHB-209ENST00000542765 COL8A1P27658 744 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 FAM69CQ0P6D2 419 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 RTN1Q16799 776 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 IER5Q5VY09 327 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 PODNQ7Z5L7 613 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 MKL2Q9ULH7 1088 aa6.78□□□□□ -1.32
LDHB-209ENST00000542765 LGR5O75473 907 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 CHSY3Q70JA7 882 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 TNFRSF25Q93038 417 aa6.77□□□□□ -1.33
LDHB-209ENST00000542765 HINFPQ9BQA5 517 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms