RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PPP1R9BQ96SB3 815 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 NCAPGQ9BPX3 1015 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.34□□□□□ -1.551e-323■■■■□ 19.6
SNHG1-219ENST00000542112 PCDHGA11Q9Y5H2 935 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 IVNS1ABPQ9Y6Y0 642 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 MRC2Q9UBG0 1479 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 RAD54L2Q9Y4B4 1467 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 CEP162Q5TB80 1403 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 M0R2N6 131 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 ERVH48-1M5A8F1 160 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 FRAT2O75474 233 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-219ENST00000542112 CCDC172P0C7W6 258 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNHG1-219ENST00000542112 RAB15P59190 212 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 ERVK-9P63128 1117 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 TRDNQ13061 729 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 ARID5BQ14865 1188 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 C1orf216Q8TAB5 229 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 SMC4Q9NTJ3 1288 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 KIAA1024Q9UPX6 916 aa5.33□□□□□ -1.56
SNHG1-219ENST00000542112 GOLGA3Q08378 1498 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 RAPGEF2Q9Y4G8 1499 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 CUL7Q14999 1698 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 WNT7AO00755 349 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 FSHRP23945 695 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 SLC19A1P41440 591 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 NR5A1Q13285 461 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 SKOR2Q2VWA4 1001 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-219ENST00000542112 HSP90AB4PQ58FF6 505 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 PHLDB3Q6NSJ2 640 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 LIAT1Q6ZQX7 453 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 SND1Q7KZF4 910 aaKnown RBP eCLIP5.32□□□□□ -1.56
SNHG1-219ENST00000542112 TXNDC2Q86VQ3 553 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 CERS3Q8IU89 383 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 GRPEL1Q9HAV7 217 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 CGNQ9P2M7 1197 aaKnown RBP5.32□□□□□ -1.56
SNHG1-219ENST00000542112 MTMR7Q9Y216 660 aa5.32□□□□□ -1.56
SNHG1-219ENST00000542112 KIF27Q86VH2 1401 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 CTTNBP2Q8WZ74 1663 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 KIF16BQ96L93 1317 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 UQCRHLA0A096LP55 91 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 ADH1CP00326 375 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 UQCRHP07919 91 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 GRM5P41594 1212 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 TMED8Q6PL24 325 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-219ENST00000542112 SLC26A8Q96RN1 970 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 PAIP2Q9BPZ3 127 aaKnown RBP5.31□□□□□ -1.56
SNHG1-219ENST00000542112 TACO1Q9BSH4 297 aaKnown RBP5.31□□□□□ -1.56
SNHG1-219ENST00000542112 MED4Q9NPJ6 270 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 DONSONQ9NYP3 566 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 SLAIN2Q9P270 581 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 FEZ2Q9UHY8 353 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-219ENST00000542112 SH3BP1Q9Y3L3 701 aa5.31□□□□□ -1.56
SNHG1-219ENST00000542112 IGF1RP08069 1367 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 PLEKHD1A6NEE1 506 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 SFI1A8K8P3 1242 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 GOLGA6L6A8MZA4 724 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 GOLGA6L22H0YM25 854 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 GOLIM4O00461 696 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 BACH1O14867 736 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 SIAH2O43255 324 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 LIG1P18858 919 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 KCNJ4P48050 445 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 HDAC1Q13547 482 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-219ENST00000542112 CCDC116Q8IYX3 515 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.566e-32■□□□□ 8.9
SNHG1-219ENST00000542112 HINFPQ9BQA5 517 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 OGFRQ9NZT2 677 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 CXXC1Q9P0U4 656 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-219ENST00000542112 NOL7Q9UMY1 257 aaKnown RBP5.3□□□□□ -1.56
SNHG1-219ENST00000542112 TLL2Q9Y6L7 1015 aa5.3□□□□□ -1.56
SNHG1-219ENST00000542112 WASLO00401 505 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-219ENST00000542112 ZNF853P0CG23 659 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 TNNT3P45378 269 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-219ENST00000542112 SCTRP47872 440 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 SYCP1Q15431 976 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 OCLNQ16625 522 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 CCDC27Q2M243 656 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 ZNF771Q7L3S4 317 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-219ENST00000542112 CYP2U1Q7Z449 544 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 GOLGA6L1Q8N7Z2 621 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 MYRIPQ8NFW9 859 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 ITFG2Q969R8 447 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 EMID1Q96A84 441 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-219ENST00000542112 MRGPRX2Q96LB1 330 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 OSBPL3Q9H4L5 887 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 UPF2Q9HAU5 1272 aaKnown RBP5.29□□□□□ -1.56
SNHG1-219ENST00000542112 PGPEP1Q9NXJ5 209 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 POGKQ9P215 609 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 NUDCQ9Y266 331 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 EMILIN1Q9Y6C2 1016 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 MRVI1Q9Y6F6 885 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 ZMYM3Q14202 1370 aa5.29□□□□□ -1.56
SNHG1-219ENST00000542112 PPP1R12AO14974 1030 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-219ENST00000542112 PRMT3O60678 531 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 GNRH1P01148 92 aa5.28□□□□□ -1.56
SNHG1-219ENST00000542112 HSPA5P11021 654 aaKnown RBP5.28□□□□□ -1.56
SNHG1-219ENST00000542112 GTF2A1P52655 376 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms