RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 SBF2Q86WG5 1849 aa22.09■■□□□ 1.13
RAB6A-208ENST00000541795 TSHZ2Q9NRE2 1034 aa22.09■■□□□ 1.13
RAB6A-208ENST00000541795 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
RAB6A-208ENST00000541795 HMMRO75330 724 aa22.08■■□□□ 1.13
RAB6A-208ENST00000541795 IGKV5-2P06315 115 aa22.08■■□□□ 1.13
RAB6A-208ENST00000541795 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
RAB6A-208ENST00000541795 C9orf78Q9NZ63 289 aaPredicted RBP22.08■■□□□ 1.13
RAB6A-208ENST00000541795 ZNF831Q5JPB2 1677 aa22.08■■□□□ 1.13
RAB6A-208ENST00000541795 NEURL1BA8MQ27 555 aa22.08■■□□□ 1.12
RAB6A-208ENST00000541795 ATP6V1AP38606 617 aa22.08■■□□□ 1.12
RAB6A-208ENST00000541795 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
RAB6A-208ENST00000541795 BRWD3Q6RI45 1802 aa22.07■■□□□ 1.12
RAB6A-208ENST00000541795 NUCB1Q02818 461 aa22.06■■□□□ 1.12
RAB6A-208ENST00000541795 ZNF772Q68DY9 489 aaPredicted RBP22.06■■□□□ 1.12
RAB6A-208ENST00000541795 DCTPP1Q9H773 170 aa22.06■■□□□ 1.12
RAB6A-208ENST00000541795 GRM8O00222 908 aa22.06■■□□□ 1.12
RAB6A-208ENST00000541795 ZBTB1Q9Y2K1 713 aa22.06■■□□□ 1.12
RAB6A-208ENST00000541795 RREB1Q92766 1687 aa22.05■■□□□ 1.12
RAB6A-208ENST00000541795 COL5A3P25940 1745 aaPredicted RBP22.05■■□□□ 1.12
RAB6A-208ENST00000541795 ATP8B2P98198 1209 aa22.05■■□□□ 1.12
RAB6A-208ENST00000541795 UTYO14607 1347 aa22.04■■□□□ 1.12
RAB6A-208ENST00000541795 KIF6Q6ZMV9 814 aa22.04■■□□□ 1.12
RAB6A-208ENST00000541795 PTF1AQ7RTS3 328 aa22.04■■□□□ 1.12
RAB6A-208ENST00000541795 ZBTB3Q9H5J0 574 aa22.04■■□□□ 1.12
RAB6A-208ENST00000541795 HDAC5Q9UQL6 1122 aa22.04■■□□□ 1.12
RAB6A-208ENST00000541795 ITPK1Q13572 414 aa22.03■■□□□ 1.12
RAB6A-208ENST00000541795 GCKRQ14397 625 aa22.03■■□□□ 1.12
RAB6A-208ENST00000541795 ANKRD45Q5TZF3 282 aa22.03■■□□□ 1.12
RAB6A-208ENST00000541795 CHD1LQ86WJ1 897 aa22.03■■□□□ 1.12
RAB6A-208ENST00000541795 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
RAB6A-208ENST00000541795 ATP5J2-PTCD1G3V325 749 aa22.02■■□□□ 1.12
RAB6A-208ENST00000541795 IL6STP40189 918 aaPredicted RBP22.01■■□□□ 1.11
RAB6A-208ENST00000541795 LNPKQ9C0E8 428 aa22.01■■□□□ 1.11
RAB6A-208ENST00000541795 CCDC87Q9NVE4 849 aa22.01■■□□□ 1.11
RAB6A-208ENST00000541795 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
RAB6A-208ENST00000541795 RBM6P78332 1123 aaKnown RBP22.01■■□□□ 1.11
RAB6A-208ENST00000541795 FBXO41Q8TF61 875 aa22.01■■□□□ 1.11
RAB6A-208ENST00000541795 MYH14Q7Z406 1995 aaKnown RBP22.01■■□□□ 1.11
RAB6A-208ENST00000541795 PDE4AP27815 886 aa22■■□□□ 1.11
RAB6A-208ENST00000541795 INTS5Q6P9B9 1019 aaKnown RBP22■■□□□ 1.11
RAB6A-208ENST00000541795 MAP3K15Q6ZN16 1313 aa22■■□□□ 1.11
RAB6A-208ENST00000541795 KRT27Q7Z3Y8 459 aa21.99■■□□□ 1.11
RAB6A-208ENST00000541795 PPP1R42Q7Z4L9 355 aa21.99■■□□□ 1.11
RAB6A-208ENST00000541795 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
RAB6A-208ENST00000541795 SSH3Q8TE77 659 aa21.99■■□□□ 1.11
RAB6A-208ENST00000541795 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
RAB6A-208ENST00000541795 ARXQ96QS3 562 aa21.99■■□□□ 1.11
RAB6A-208ENST00000541795 LY75O60449 1722 aa21.98■■□□□ 1.11
RAB6A-208ENST00000541795 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
RAB6A-208ENST00000541795 SRGAP3O43295 1099 aa21.97■■□□□ 1.11
RAB6A-208ENST00000541795 POLA2Q14181 598 aa21.97■■□□□ 1.11
RAB6A-208ENST00000541795 CWC25Q9NXE8 425 aaPredicted RBP21.97■■□□□ 1.11
RAB6A-208ENST00000541795 A0A087WZG4 1122 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
RAB6A-208ENST00000541795 TCIRG1Q13488 830 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 MTX1Q13505 466 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 ZBTB47Q9UFB7 747 aaPredicted RBP21.96■■□□□ 1.11
RAB6A-208ENST00000541795 NUP98P52948 1817 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 FAM196AQ6ZSG2 479 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 CCDC191Q8NCU4 936 aa21.96■■□□□ 1.11
RAB6A-208ENST00000541795 GIGYF2Q6Y7W6 1299 aaKnown RBP21.95■■□□□ 1.1
RAB6A-208ENST00000541795 UBE3BQ7Z3V4 1068 aa21.95■■□□□ 1.1
RAB6A-208ENST00000541795 DZIP3Q86Y13 1208 aaKnown RBP21.95■■□□□ 1.1
RAB6A-208ENST00000541795 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
RAB6A-208ENST00000541795 KAZALD1Q96I82 304 aa21.95■■□□□ 1.1
RAB6A-208ENST00000541795 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
RAB6A-208ENST00000541795 BCL11BQ9C0K0 894 aaPredicted RBP21.95■■□□□ 1.1
RAB6A-208ENST00000541795 BICC1Q9H694 974 aaKnown RBP21.95■■□□□ 1.1
RAB6A-208ENST00000541795 EXOC6BQ9Y2D4 811 aa21.95■■□□□ 1.1
RAB6A-208ENST00000541795 APBB1O00213 710 aa21.94■■□□□ 1.1
RAB6A-208ENST00000541795 COL15A1P39059 1388 aa21.94■■□□□ 1.1
RAB6A-208ENST00000541795 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 KCNQ4P56696 695 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 HLFQ16534 295 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 JARID2Q92833 1246 aaPredicted RBP21.93■■□□□ 1.1
RAB6A-208ENST00000541795 TBC1D2BQ9UPU7 963 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 TAF1LQ8IZX4 1826 aa21.93■■□□□ 1.1
RAB6A-208ENST00000541795 H7C1W4 665 aa21.92■■□□□ 1.1
RAB6A-208ENST00000541795 CASP7P55210 303 aa21.92■■□□□ 1.1
RAB6A-208ENST00000541795 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
RAB6A-208ENST00000541795 CCNL1Q9UK58 526 aaPredicted RBP21.92■■□□□ 1.1
RAB6A-208ENST00000541795 CNTNAP4Q9C0A0 1308 aa21.92■■□□□ 1.1
RAB6A-208ENST00000541795 EP400Q96L91 3159 aa21.92■■□□□ 1.1
RAB6A-208ENST00000541795 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
RAB6A-208ENST00000541795 BACH2Q9BYV9 841 aa21.91■■□□□ 1.1
RAB6A-208ENST00000541795 SMARCA5O60264 1052 aaPredicted RBP21.9■■□□□ 1.1
RAB6A-208ENST00000541795 RXRBP28702 533 aa21.9■■□□□ 1.1
RAB6A-208ENST00000541795 SURF6O75683 361 aaKnown RBP21.9■■□□□ 1.1
RAB6A-208ENST00000541795 EPHA10Q5JZY3 1008 aa21.9■■□□□ 1.1
RAB6A-208ENST00000541795 LRRCC1Q9C099 1032 aa21.9■■□□□ 1.1
RAB6A-208ENST00000541795 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
RAB6A-208ENST00000541795 RAB11FIP3O75154 756 aa21.88■■□□□ 1.09
RAB6A-208ENST00000541795 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
RAB6A-208ENST00000541795 BCL11AQ9H165 835 aa21.88■■□□□ 1.09
RAB6A-208ENST00000541795 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
RAB6A-208ENST00000541795 GPTP24298 496 aa21.87■■□□□ 1.09
RAB6A-208ENST00000541795 RABL6Q3YEC7 729 aaPredicted RBP21.87■■□□□ 1.09
RAB6A-208ENST00000541795 HSP90AB4PQ58FF6 505 aa21.87■■□□□ 1.09
RAB6A-208ENST00000541795 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms