RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ADCY9O60503 1353 aa20.64■□□□□ 0.9
EPB41L3-204ENST00000540638 OSBPL3Q9H4L5 887 aa20.64■□□□□ 0.89
EPB41L3-204ENST00000540638 PXDNQ92626 1479 aa20.64■□□□□ 0.89
EPB41L3-204ENST00000540638 RNF214Q8ND24 703 aa20.64■□□□□ 0.89
EPB41L3-204ENST00000540638 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.89
EPB41L3-204ENST00000540638 VIRMAQ69YN4 1812 aaKnown RBP20.63■□□□□ 0.89
EPB41L3-204ENST00000540638 SKOR2Q2VWA4 1001 aaPredicted RBP20.63■□□□□ 0.89
EPB41L3-204ENST00000540638 PLCB2Q00722 1185 aa20.63■□□□□ 0.89
EPB41L3-204ENST00000540638 RUFY2Q8WXA3 655 aa20.63■□□□□ 0.89
EPB41L3-204ENST00000540638 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
EPB41L3-204ENST00000540638 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
EPB41L3-204ENST00000540638 CEMIPQ8WUJ3 1361 aa20.62■□□□□ 0.89
EPB41L3-204ENST00000540638 CYP27B1O15528 508 aa20.62■□□□□ 0.89
EPB41L3-204ENST00000540638 A1BGP04217 495 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 HOXB7P09629 217 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 MRE11P49959 708 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 STK3Q13188 491 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 GAS2L3Q86XJ1 694 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 FAM227BQ96M60 508 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 AK9Q5TCS8 1911 aa20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
EPB41L3-204ENST00000540638 ALDH1L1O75891 902 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 FAM177BA6PVY3 158 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 FOSBP53539 338 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 RASEFQ8IZ41 740 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 CCDC83Q8IWF9 413 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 PI4K2BQ8TCG2 481 aa20.6■□□□□ 0.89
EPB41L3-204ENST00000540638 PPFIA3O75145 1194 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 EPHA10Q5JZY3 1008 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 ERC1Q8IUD2 1116 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 CWC22Q9HCG8 908 aaKnown RBP20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 TOPAZ1Q8N9V7 1692 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 IGKV5-2P06315 115 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 POLA2Q14181 598 aa20.59■□□□□ 0.89
EPB41L3-204ENST00000540638 GORABQ5T7V8 394 aa20.58■□□□□ 0.89
EPB41L3-204ENST00000540638 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.89
EPB41L3-204ENST00000540638 PTH1RQ03431 593 aa20.58■□□□□ 0.88
EPB41L3-204ENST00000540638 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.88
EPB41L3-204ENST00000540638 LMBR1LQ6UX01 489 aa20.58■□□□□ 0.88
EPB41L3-204ENST00000540638 NECAB1Q8N987 351 aa20.58■□□□□ 0.88
EPB41L3-204ENST00000540638 C1orf167Q5SNV9 1468 aa20.58■□□□□ 0.88
EPB41L3-204ENST00000540638 SGSM2O43147 1006 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 MPNDQ8N594 471 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 DCAF5Q96JK2 942 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 GCKRQ14397 625 aa20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
EPB41L3-204ENST00000540638 FIBPO43427 364 aa20.56■□□□□ 0.88
EPB41L3-204ENST00000540638 DDX46Q7L014 1031 aaKnown RBP20.56■□□□□ 0.88
EPB41L3-204ENST00000540638 NMIQ13287 307 aaPredicted RBP20.56■□□□□ 0.88
EPB41L3-204ENST00000540638 TTLL7Q6ZT98 887 aa20.56■□□□□ 0.88
EPB41L3-204ENST00000540638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 SYCE3A1L190 88 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 SASH1O94885 1247 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 HSP90B1P14625 803 aaKnown RBP20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 AK2P54819 239 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 TFCP2Q12800 502 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 SNX14Q9Y5W7 946 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 NASPP49321 788 aaPredicted RBP20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 FERMT3Q86UX7 667 aa20.55■□□□□ 0.88
EPB41L3-204ENST00000540638 CHGBP05060 677 aa20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 DDIT3P35638 169 aa20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 MCM2P49736 904 aa20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 NAP1L5Q96NT1 182 aaPredicted RBP20.54■□□□□ 0.88
EPB41L3-204ENST00000540638 PTMSP20962 102 aa20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 GPTP24298 496 aa20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 ADCK5Q3MIX3 580 aa20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 CYP46A1Q9Y6A2 500 aa20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
EPB41L3-204ENST00000540638 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 RBM8AQ9Y5S9 174 aaKnown RBP20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 TIMM10P62072 90 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 CCDC129Q6ZRS4 1044 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 PDIA6Q15084 440 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 EVI5LQ96CN4 794 aa20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
EPB41L3-204ENST00000540638 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 LRRC2Q9BYS8 371 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 HSPA4P34932 840 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 DBNDD2Q9BQY9 259 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 NALCNQ8IZF0 1738 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 XRN1Q8IZH2 1706 aaKnown RBP20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 SLFNL1Q499Z3 407 aa20.51■□□□□ 0.87
EPB41L3-204ENST00000540638 KLHL40Q2TBA0 621 aa20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 RAD50Q92878 1312 aa20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 SLAIN2Q9P270 581 aa20.5■□□□□ 0.87
EPB41L3-204ENST00000540638 NSFL1CQ9UNZ2 370 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms