RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CAVIN1Q6NZI2 390 aaKnown RBP14.02□□□□□ -0.17
C11orf54-214ENST00000540113 CLEC17AQ6ZS10 378 aa14.02□□□□□ -0.17
C11orf54-214ENST00000540113 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
C11orf54-214ENST00000540113 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 CWC22Q9HCG8 908 aaKnown RBP14.01□□□□□ -0.17
C11orf54-214ENST00000540113 C9orf78Q9NZ63 289 aaPredicted RBP14.01□□□□□ -0.17
C11orf54-214ENST00000540113 RBM27Q9P2N5 1060 aaKnown RBP14.01□□□□□ -0.17
C11orf54-214ENST00000540113 MRC1P22897 1456 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 AOX1Q06278 1338 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 RAB11FIP3O75154 756 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 MCCP23508 829 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 KIF1BPQ96EK5 621 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
C11orf54-214ENST00000540113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
C11orf54-214ENST00000540113 PIP4K2AP48426 406 aaPredicted RBP14□□□□□ -0.17
C11orf54-214ENST00000540113 KLHL40Q2TBA0 621 aa14□□□□□ -0.17
C11orf54-214ENST00000540113 ZNF790Q6PG37 636 aa14□□□□□ -0.17
C11orf54-214ENST00000540113 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
C11orf54-214ENST00000540113 SPG7Q9UQ90 795 aa14□□□□□ -0.17
C11orf54-214ENST00000540113 ALDH1L1O75891 902 aa14□□□□□ -0.17
C11orf54-214ENST00000540113 DDX21Q9NR30 783 aaKnown RBP eCLIP14□□□□□ -0.17
C11orf54-214ENST00000540113 HYPKQ9NX55 129 aa14□□□□□ -0.17
C11orf54-214ENST00000540113 NSFL1CQ9UNZ2 370 aaKnown RBP14□□□□□ -0.17
C11orf54-214ENST00000540113 GLI3P10071 1580 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 CYP27B1O15528 508 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 CSB-PGBD3P0DP91 1061 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 MTX1Q13505 466 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 NFATC2IPQ8NCF5 419 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 CPDO75976 1380 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 MYL6BP14649 208 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 CPA1P15085 419 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 PTMSP20962 102 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 GPT2Q8TD30 523 aa13.99□□□□□ -0.17
C11orf54-214ENST00000540113 JARID2Q92833 1246 aaPredicted RBP13.99□□□□□ -0.17
C11orf54-214ENST00000540113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.178e-7■■■□□ 14.9
C11orf54-214ENST00000540113 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
C11orf54-214ENST00000540113 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
C11orf54-214ENST00000540113 SUCLG2Q96I99 432 aa13.98□□□□□ -0.17
C11orf54-214ENST00000540113 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
C11orf54-214ENST00000540113 PARP4Q9UKK3 1724 aaKnown RBP13.97□□□□□ -0.17
C11orf54-214ENST00000540113 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
C11orf54-214ENST00000540113 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
C11orf54-214ENST00000540113 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
C11orf54-214ENST00000540113 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
C11orf54-214ENST00000540113 ZNF496Q96IT1 587 aaPredicted RBP13.97□□□□□ -0.17
C11orf54-214ENST00000540113 SGSM2O43147 1006 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 HSPA4P34932 840 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 ZSCAN23Q3MJ62 389 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 LINS1Q8NG48 757 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 SIL1Q9H173 461 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 IGKV5-2P06315 115 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 SNX14Q9Y5W7 946 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 UTYO14607 1347 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.17
C11orf54-214ENST00000540113 ANAPC15P60006 121 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 LSG1Q9H089 658 aaKnown RBP13.95□□□□□ -0.18
C11orf54-214ENST00000540113 BICC1Q9H694 974 aaKnown RBP13.95□□□□□ -0.18
C11orf54-214ENST00000540113 CUL4AQ13619 759 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-214ENST00000540113 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
C11orf54-214ENST00000540113 GRM8O00222 908 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 PTH1RQ03431 593 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 AACSQ86V21 672 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
C11orf54-214ENST00000540113 USP42Q9H9J4 1324 aaKnown RBP13.94□□□□□ -0.18
C11orf54-214ENST00000540113 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 RAD50Q92878 1312 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
C11orf54-214ENST00000540113 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
C11orf54-214ENST00000540113 HSP90AB4PQ58FF6 505 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
C11orf54-214ENST00000540113 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
C11orf54-214ENST00000540113 BRD1O95696 1058 aa13.93□□□□□ -0.18
C11orf54-214ENST00000540113 IFIT2P09913 472 aaKnown RBP13.93□□□□□ -0.18
C11orf54-214ENST00000540113 MCM2P49736 904 aa13.93□□□□□ -0.18
C11orf54-214ENST00000540113 TMEM63CQ9P1W3 806 aa13.93□□□□□ -0.18
C11orf54-214ENST00000540113 ISY1Q9ULR0 285 aaKnown RBP13.93□□□□□ -0.18
C11orf54-214ENST00000540113 SASH1O94885 1247 aa13.93□□□□□ -0.18
C11orf54-214ENST00000540113 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
C11orf54-214ENST00000540113 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 SOS2Q07890 1332 aaPredicted RBP13.92□□□□□ -0.18
C11orf54-214ENST00000540113 GLRX3O76003 335 aaKnown RBP13.92□□□□□ -0.18
C11orf54-214ENST00000540113 PRIM1P49642 420 aaKnown RBP13.92□□□□□ -0.18
C11orf54-214ENST00000540113 AK2P54819 239 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 COPS6Q7L5N1 327 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
C11orf54-214ENST00000540113 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
C11orf54-214ENST00000540113 AFDNP55196 1824 aaKnown RBP13.92□□□□□ -0.18
C11orf54-214ENST00000540113 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms