RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-222ENST00000539680 ADGRL1O94910 1474 aa10.4□□□□□ -0.74
ECHDC2-222ENST00000539680 PIK3R4Q99570 1358 aa10.4□□□□□ -0.74
ECHDC2-222ENST00000539680 PDE4BQ07343 736 aa10.4□□□□□ -0.75
ECHDC2-222ENST00000539680 CDC5LQ99459 802 aaKnown RBP10.4□□□□□ -0.75
ECHDC2-222ENST00000539680 DBF4Q9UBU7 674 aaPredicted RBP10.4□□□□□ -0.75
ECHDC2-222ENST00000539680 IL16Q14005 1332 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 BAG3O95817 575 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 IFFO1Q0D2I5 559 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 NUP88Q99567 741 aaPredicted RBP10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 BMP15O95972 392 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 UQCRFS1P1P0C7P4 283 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 CNNM3Q8NE01 707 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 TTC12Q9H892 705 aaPredicted RBP10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 PPP1R42Q7Z4L9 355 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 CD109Q6YHK3 1445 aa10.39□□□□□ -0.75
ECHDC2-222ENST00000539680 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 SYCE3A1L190 88 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 MCM5P33992 734 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 RBM10P98175 930 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 TRMT112Q9UI30 125 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 CABP5Q9NP86 173 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 IFIT3O14879 490 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 CAMK4Q16566 473 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 USP37Q86T82 979 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 ZGPATQ8N5A5 531 aaKnown RBP10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 KAT14Q9H8E8 782 aa10.38□□□□□ -0.75
ECHDC2-222ENST00000539680 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 RANBP6O60518 1105 aaKnown RBP10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 TSNARE1Q96NA8 513 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 RARSP54136 660 aaKnown RBP10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 ST5P78524 1137 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 ERMNQ8TAM6 284 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 PIBF1Q8WXW3 757 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 CWC25Q9NXE8 425 aaPredicted RBP10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 ESPNB1AK53 854 aa10.37□□□□□ -0.75
ECHDC2-222ENST00000539680 GSTTP1A0A1W2PQM5 241 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 BOLA2Q9H3K6 86 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 EXOC6BQ9Y2D4 811 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 PABPN1LA6NDY0 278 aaKnown RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 KRT23Q9C075 422 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 CTNNA2P26232 953 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 MTIF2P46199 727 aaKnown RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 MCM10Q7L590 875 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 GIMAP7Q8NHV1 300 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 NCOA7Q8NI08 942 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 DMRT2Q9Y5R5 561 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 WASLO00401 505 aaPredicted RBP10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 CCDC40Q4G0X9 1142 aa10.36□□□□□ -0.75
ECHDC2-222ENST00000539680 NAIPQ13075 1403 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 CKAP4Q07065 602 aaKnown RBP10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 CRNKL1Q9BZJ0 848 aaKnown RBP10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 MYO1BO43795 1136 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 FERP16591 822 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 PRPHP41219 470 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 ZC3H6P61129 1189 aaKnown RBP10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 ZFYP08048 801 aaPredicted RBP10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 MFSD6Q6ZSS7 791 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 HOMEZQ8IX15 550 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 FSIP1Q8NA03 581 aa10.35□□□□□ -0.75
ECHDC2-222ENST00000539680 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 TDRD12Q587J7 1177 aaKnown RBP10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 CTNNBL1Q8WYA6 563 aaPredicted RBP10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 TUBB4AP04350 444 aa10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 TMEM67Q5HYA8 995 aa10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 SPECC1LQ69YQ0 1117 aa10.34□□□□□ -0.75
ECHDC2-222ENST00000539680 CCDC113Q9H0I3 377 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms