RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 ABCA6Q8N139 1617 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 ERBB3P21860 1342 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 SMC2O95347 1197 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 LIG1P18858 919 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 ARID4AP29374 1257 aaPredicted RBP12.9□□□□□ -0.34
DDX11-213ENST00000539049 TET3O43151 1660 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
DDX11-213ENST00000539049 MAP3K4Q9Y6R4 1608 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 SMC1AQ14683 1233 aaKnown RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 KIAA1210Q9ULL0 1709 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 UHRF1BP1LA0JNW5 1464 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 SCP2P22307 547 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 TRIM5Q9C035 493 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 ADAM21Q9UKJ8 722 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 ANKRD65E5RJM6 399 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX11-213ENST00000539049 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 CORO7P57737 925 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 REXO1L1PQ8IX06 675 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
DDX11-213ENST00000539049 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
DDX11-213ENST00000539049 MYOM2P54296 1465 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 FBXO31Q5XUX0 539 aaPredicted RBP12.88□□□□□ -0.35
DDX11-213ENST00000539049 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 KLHL33A6NCF5 533 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 ATF7IPQ6VMQ6 1270 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
DDX11-213ENST00000539049 CCDC34Q96HJ3 373 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
DDX11-213ENST00000539049 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
DDX11-213ENST00000539049 USP8P40818 1118 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 MICALL1Q8N3F8 863 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 EVC2Q86UK5 1308 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 TTC19Q6DKK2 380 aaPredicted RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 CACTINQ8WUQ7 758 aaKnown RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 UBXN4Q92575 508 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 TRMT1Q9NXH9 659 aaKnown RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 USP27XA6NNY8 438 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 SEC31AO94979 1220 aaKnown RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
DDX11-213ENST00000539049 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
DDX11-213ENST00000539049 NEBLO76041 1014 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 NOS1P29475 1434 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
DDX11-213ENST00000539049 ATP8B1O43520 1251 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 TADA2BQ86TJ2 420 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
DDX11-213ENST00000539049 CPP00450 1065 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 NAIF1Q69YI7 327 aaPredicted RBP12.85□□□□□ -0.35
DDX11-213ENST00000539049 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 ELP1O95163 1332 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 ZNF513Q8N8E2 541 aaPredicted RBP12.85□□□□□ -0.35
DDX11-213ENST00000539049 ITFG2Q969R8 447 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
DDX11-213ENST00000539049 TMX3Q96JJ7 454 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 UBXN6Q9BZV1 441 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
DDX11-213ENST00000539049 UBE2HP62256 183 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
DDX11-213ENST00000539049 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 CHMP3Q9Y3E7 222 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 ZNF518AQ6AHZ1 1483 aa12.84□□□□□ -0.35
DDX11-213ENST00000539049 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
DDX11-213ENST00000539049 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
DDX11-213ENST00000539049 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
DDX11-213ENST00000539049 LUZP1Q86V48 1076 aa12.83□□□□□ -0.36
DDX11-213ENST00000539049 MCM10Q7L590 875 aa12.83□□□□□ -0.36
DDX11-213ENST00000539049 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
DDX11-213ENST00000539049 MKRN1Q9UHC7 482 aaKnown RBP12.83□□□□□ -0.36
DDX11-213ENST00000539049 A0A087WUV0 522 aaPredicted RBP12.82□□□□□ -0.36
DDX11-213ENST00000539049 ZNF75DP51815 510 aa12.82□□□□□ -0.36
DDX11-213ENST00000539049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.82□□□□□ -0.36
DDX11-213ENST00000539049 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms