RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
MRE11-208ENST00000538923 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
MRE11-208ENST00000538923 WWC3Q9ULE0 1092 aa12.22□□□□□ -0.45
MRE11-208ENST00000538923 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
MRE11-208ENST00000538923 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
MRE11-208ENST00000538923 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
MRE11-208ENST00000538923 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
MRE11-208ENST00000538923 KDRP35968 1356 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 CLSPNQ9HAW4 1339 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 HSPA6P17066 643 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 TGFB2P61812 414 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
MRE11-208ENST00000538923 UBR3Q6ZT12 1888 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 ITGB4P16144 1822 aa12.2□□□□□ -0.46
MRE11-208ENST00000538923 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
MRE11-208ENST00000538923 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
MRE11-208ENST00000538923 RC3H1Q5TC82 1133 aaKnown RBP12.19□□□□□ -0.46
MRE11-208ENST00000538923 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
MRE11-208ENST00000538923 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
MRE11-208ENST00000538923 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
MRE11-208ENST00000538923 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
MRE11-208ENST00000538923 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
MRE11-208ENST00000538923 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 RFC4P35249 363 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 CABP4P57796 275 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 BCS1LQ9Y276 419 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
MRE11-208ENST00000538923 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
MRE11-208ENST00000538923 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 GYS1P13807 737 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
MRE11-208ENST00000538923 NBR1Q14596 966 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 PANK3Q9H999 370 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 PARP3Q9Y6F1 533 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
MRE11-208ENST00000538923 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
MRE11-208ENST00000538923 MTHFSP49914 203 aa12.15□□□□□ -0.46
MRE11-208ENST00000538923 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
MRE11-208ENST00000538923 FAM205CA6NFA0 338 aa12.14□□□□□ -0.47
MRE11-208ENST00000538923 POTEMA6NI47 508 aa12.14□□□□□ -0.47
MRE11-208ENST00000538923 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
MRE11-208ENST00000538923 SEMA3EO15041 775 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 FCHSD2O94868 740 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
MRE11-208ENST00000538923 DPEP1P16444 411 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
MRE11-208ENST00000538923 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
MRE11-208ENST00000538923 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 NFATC2IPQ8NCF5 419 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 DDX12PQ92771 950 aa12.13□□□□□ -0.47
MRE11-208ENST00000538923 TOMM70O94826 608 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 AEBP1Q8IUX7 1158 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 ZNF454Q8N9F8 522 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
MRE11-208ENST00000538923 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
MRE11-208ENST00000538923 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
MRE11-208ENST00000538923 APLP1P51693 650 aa12.11□□□□□ -0.47
MRE11-208ENST00000538923 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
MRE11-208ENST00000538923 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
MRE11-208ENST00000538923 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
MRE11-208ENST00000538923 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
MRE11-208ENST00000538923 KCNA3P22001 575 aa12.1□□□□□ -0.47
MRE11-208ENST00000538923 IL13P35225 146 aa12.1□□□□□ -0.47
MRE11-208ENST00000538923 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
MRE11-208ENST00000538923 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
MRE11-208ENST00000538923 DALRD3Q5D0E6 543 aaKnown RBP12.09□□□□□ -0.47
MRE11-208ENST00000538923 AKAP4Q5JQC9 854 aa12.09□□□□□ -0.47
MRE11-208ENST00000538923 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
MRE11-208ENST00000538923 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
MRE11-208ENST00000538923 SRP68Q9UHB9 627 aaKnown RBP12.09□□□□□ -0.47
MRE11-208ENST00000538923 ZPR1O75312 459 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 MLLT3P42568 568 aaPredicted RBP12.08□□□□□ -0.48
MRE11-208ENST00000538923 FOSBP53539 338 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 DDR1Q08345 913 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 INTS5Q6P9B9 1019 aaKnown RBP12.08□□□□□ -0.48
MRE11-208ENST00000538923 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
MRE11-208ENST00000538923 POLRMTO00411 1230 aaKnown RBP12.07□□□□□ -0.48
MRE11-208ENST00000538923 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
MRE11-208ENST00000538923 N4BP2Q86UW6 1770 aaPredicted RBP12.06□□□□□ -0.48
MRE11-208ENST00000538923 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
MRE11-208ENST00000538923 TM4SF1P30408 202 aa12.06□□□□□ -0.48
MRE11-208ENST00000538923 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
MRE11-208ENST00000538923 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
MRE11-208ENST00000538923 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
MRE11-208ENST00000538923 PCDHGA10Q9Y5H3 936 aa12.06□□□□□ -0.48
MRE11-208ENST00000538923 KDM2BQ8NHM5 1336 aa12.06□□□□□ -0.48
MRE11-208ENST00000538923 CHRNA5P30532 468 aa12.05□□□□□ -0.48
MRE11-208ENST00000538923 TYW1BQ6NUM6 668 aa12.05□□□□□ -0.48
MRE11-208ENST00000538923 EPAS1Q99814 870 aa12.05□□□□□ -0.48
MRE11-208ENST00000538923 LGR6Q9HBX8 967 aa12.05□□□□□ -0.48
MRE11-208ENST00000538923 RNF181Q9P0P0 153 aa12.05□□□□□ -0.48
MRE11-208ENST00000538923 SOS1Q07889 1333 aaPredicted RBP12.05□□□□□ -0.48
MRE11-208ENST00000538923 MRC1P22897 1456 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms