RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 KIF2AO00139 706 aaPredicted RBP19.47■□□□□ 0.71
SCARB1-205ENST00000538291 ANKRD24Q8TF21 1146 aa19.47■□□□□ 0.71
SCARB1-205ENST00000538291 UBXN4Q92575 508 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 ATP5J2-PTCD1G3V325 749 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 CNNM3Q8NE01 707 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 CTAGE5O15320 804 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 AMPD3Q01432 767 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 UBE3BQ7Z3V4 1068 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 TAF3Q5VWG9 929 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 CCDC102AQ96A19 550 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 GBP3Q9H0R5 595 aa19.46■□□□□ 0.71
SCARB1-205ENST00000538291 NKTRP30414 1462 aaKnown RBP19.46■□□□□ 0.7
SCARB1-205ENST00000538291 CAMSAP2Q08AD1 1489 aa19.46■□□□□ 0.7
SCARB1-205ENST00000538291 LIG1P18858 919 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 TMEM67Q5HYA8 995 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 NBPF6Q5VWK0 638 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
SCARB1-205ENST00000538291 NBPF4Q96M43 638 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 NSD2O96028 1365 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 IARSP41252 1262 aaKnown RBP19.45■□□□□ 0.7
SCARB1-205ENST00000538291 STXBP4Q6ZWJ1 553 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 UQCRFS1P1P0C7P4 283 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 TOP1P11387 765 aaKnown RBP19.45■□□□□ 0.7
SCARB1-205ENST00000538291 GSTO1P78417 241 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 MPHOSPH6Q99547 160 aaKnown RBP19.45■□□□□ 0.7
SCARB1-205ENST00000538291 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 CCDC183Q5T5S1 534 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 PLCD4Q9BRC7 762 aa19.45■□□□□ 0.7
SCARB1-205ENST00000538291 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 MFSD6Q6ZSS7 791 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 CCDC91Q7Z6B0 441 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 KIF5CO60282 957 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 CCT2P78371 535 aaKnown RBP19.44■□□□□ 0.7
SCARB1-205ENST00000538291 CCDC152Q4G0S7 254 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 TTC21AQ8NDW8 1320 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 VAT1LQ9HCJ6 419 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 BRPF3Q9ULD4 1205 aa19.44■□□□□ 0.7
SCARB1-205ENST00000538291 CRNKL1Q9BZJ0 848 aaKnown RBP19.43■□□□□ 0.7
SCARB1-205ENST00000538291 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
SCARB1-205ENST00000538291 CRACR2AQ9BSW2 395 aa19.43■□□□□ 0.7
SCARB1-205ENST00000538291 USO1O60763 962 aaKnown RBP19.43■□□□□ 0.7
SCARB1-205ENST00000538291 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
SCARB1-205ENST00000538291 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
SCARB1-205ENST00000538291 CHRNA2Q15822 529 aa19.43■□□□□ 0.7
SCARB1-205ENST00000538291 RBM10P98175 930 aaKnown RBP19.42■□□□□ 0.7
SCARB1-205ENST00000538291 PEG3Q9GZU2 1588 aa19.42■□□□□ 0.7
SCARB1-205ENST00000538291 IDEP14735 1019 aa19.42■□□□□ 0.7
SCARB1-205ENST00000538291 PYM1Q9BRP8 204 aaKnown RBP19.42■□□□□ 0.7
SCARB1-205ENST00000538291 GSTTP1A0A1W2PQM5 241 aa19.42■□□□□ 0.7
SCARB1-205ENST00000538291 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
SCARB1-205ENST00000538291 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
SCARB1-205ENST00000538291 ACEP12821 1306 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 YEATS4O95619 227 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 PPM1FP49593 454 aaPredicted RBP19.41■□□□□ 0.7
SCARB1-205ENST00000538291 LUZP1Q86V48 1076 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 MSH6P52701 1360 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 NCOA7Q8NI08 942 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 SAMM50Q9Y512 469 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 MTIF2P46199 727 aaKnown RBP19.41■□□□□ 0.7
SCARB1-205ENST00000538291 NUP88Q99567 741 aaPredicted RBP19.41■□□□□ 0.7
SCARB1-205ENST00000538291 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 KIF14Q15058 1648 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 CCDC40Q4G0X9 1142 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 HOOK3Q86VS8 718 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 FSIP1Q8NA03 581 aa19.41■□□□□ 0.7
SCARB1-205ENST00000538291 UBA7P41226 1012 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 CTNNBL1Q8WYA6 563 aaPredicted RBP19.4■□□□□ 0.7
SCARB1-205ENST00000538291 FERMT2Q96AC1 680 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 MACROD2A1Z1Q3 448 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 CCDC178Q5BJE1 867 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 TCERG1LQ5VWI1 586 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 NOS1P29475 1434 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 TRIM27P14373 513 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 TRAF1Q13077 416 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 DYDC1Q8WWB3 177 aa19.4■□□□□ 0.7
SCARB1-205ENST00000538291 DRC1Q96MC2 740 aa19.39■□□□□ 0.7
SCARB1-205ENST00000538291 LRRC27Q9C0I9 530 aa19.39■□□□□ 0.7
SCARB1-205ENST00000538291 PAFAH1B1P43034 410 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 TRMT1LQ7Z2T5 733 aaKnown RBP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 TOM1O60784 492 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 CTNNA2P26232 953 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 DDX19AQ9NUU7 478 aaKnown RBP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 HMG20BQ9P0W2 317 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 HDAC9Q9UKV0 1011 aa19.39■□□□□ 0.69
SCARB1-205ENST00000538291 PRKCSHP14314 528 aaPredicted RBP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 ORC3Q9UBD5 711 aaPredicted RBP19.39■□□□□ 0.69
SCARB1-205ENST00000538291 SYCP3Q8IZU3 236 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 HAND2P61296 217 aa19.38■□□□□ 0.69
SCARB1-205ENST00000538291 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
SCARB1-205ENST00000538291 PPP4R3BQ5MIZ7 849 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms