RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 RGPD2P0DJD1 1756 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
RAB40C-203ENST00000535977 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 ANO2Q9NQ90 1003 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 CAMTA1Q9Y6Y1 1673 aa21.63■■□□□ 1.05
RAB40C-203ENST00000535977 INTS4Q96HW7 963 aaKnown RBP21.62■■□□□ 1.05
RAB40C-203ENST00000535977 GIGYF1O75420 1035 aaPredicted RBP21.62■■□□□ 1.05
RAB40C-203ENST00000535977 HYPKQ9NX55 129 aa21.62■■□□□ 1.05
RAB40C-203ENST00000535977 KIF1AQ12756 1690 aa21.62■■□□□ 1.05
RAB40C-203ENST00000535977 KCNQ3O43525 872 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 ATP2B3Q16720 1220 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
RAB40C-203ENST00000535977 ADCY9O60503 1353 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
RAB40C-203ENST00000535977 KSR2Q6VAB6 950 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 KRT28Q7Z3Y7 464 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 CNTROBQ8N137 903 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 IL1RAPL2Q9NP60 686 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 TTC41PQ6P2S7 1318 aa21.61■■□□□ 1.05
RAB40C-203ENST00000535977 CUL4AQ13619 759 aa21.6■■□□□ 1.05
RAB40C-203ENST00000535977 LMBRD1Q9NUN5 540 aa21.6■■□□□ 1.05
RAB40C-203ENST00000535977 ERC1Q8IUD2 1116 aa21.6■■□□□ 1.05
RAB40C-203ENST00000535977 TMX3Q96JJ7 454 aa21.6■■□□□ 1.05
RAB40C-203ENST00000535977 TMEM51Q9NW97 253 aa21.6■■□□□ 1.05
RAB40C-203ENST00000535977 PI4K2BQ8TCG2 481 aa21.59■■□□□ 1.05
RAB40C-203ENST00000535977 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
RAB40C-203ENST00000535977 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
RAB40C-203ENST00000535977 NUTM1Q86Y26 1132 aa21.58■■□□□ 1.05
RAB40C-203ENST00000535977 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.05
RAB40C-203ENST00000535977 PDIA4P13667 645 aaKnown RBP21.58■■□□□ 1.05
RAB40C-203ENST00000535977 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
RAB40C-203ENST00000535977 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
RAB40C-203ENST00000535977 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
RAB40C-203ENST00000535977 GLRX3O76003 335 aaKnown RBP21.57■■□□□ 1.04
RAB40C-203ENST00000535977 HSPA4P34932 840 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 C19orf44Q9H6X5 657 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 STRCQ7RTU9 1775 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 AK9Q5TCS8 1911 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 DNTTIP2Q5QJE6 756 aaKnown RBP21.57■■□□□ 1.04
RAB40C-203ENST00000535977 LMOD2Q6P5Q4 547 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 MAP3K2Q9Y2U5 619 aa21.57■■□□□ 1.04
RAB40C-203ENST00000535977 KIAA2012Q0VF49 1180 aa21.56■■□□□ 1.04
RAB40C-203ENST00000535977 CLASRPQ8N2M8 674 aaKnown RBP21.56■■□□□ 1.04
RAB40C-203ENST00000535977 GPATCH3Q96I76 525 aa21.56■■□□□ 1.04
RAB40C-203ENST00000535977 ADAMTS7Q9UKP4 1686 aa21.56■■□□□ 1.04
RAB40C-203ENST00000535977 PXDNQ92626 1479 aa21.56■■□□□ 1.04
RAB40C-203ENST00000535977 C1orf167Q5SNV9 1468 aa21.55■■□□□ 1.04
RAB40C-203ENST00000535977 LINS1Q8NG48 757 aa21.55■■□□□ 1.04
RAB40C-203ENST00000535977 DDX21Q9NR30 783 aaKnown RBP eCLIP21.55■■□□□ 1.04
RAB40C-203ENST00000535977 SGSM2O43147 1006 aa21.55■■□□□ 1.04
RAB40C-203ENST00000535977 OS9Q13438 667 aaPredicted RBP21.55■■□□□ 1.04
RAB40C-203ENST00000535977 RUFY2Q8WXA3 655 aa21.54■■□□□ 1.04
RAB40C-203ENST00000535977 GPT2Q8TD30 523 aa21.54■■□□□ 1.04
RAB40C-203ENST00000535977 PALD1Q9ULE6 856 aa21.54■■□□□ 1.04
RAB40C-203ENST00000535977 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-203ENST00000535977 UTYO14607 1347 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.04
RAB40C-203ENST00000535977 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
RAB40C-203ENST00000535977 ERBB3P21860 1342 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 AXIN2Q9Y2T1 843 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 ZDHHC9Q9Y397 364 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 RAD50Q92878 1312 aa21.53■■□□□ 1.04
RAB40C-203ENST00000535977 LRSAM1Q6UWE0 723 aa21.52■■□□□ 1.04
RAB40C-203ENST00000535977 RAPGEF4Q8WZA2 1011 aa21.52■■□□□ 1.04
RAB40C-203ENST00000535977 PRIMPOLQ96LW4 560 aa21.52■■□□□ 1.04
RAB40C-203ENST00000535977 ANXA1P04083 346 aa21.52■■□□□ 1.04
RAB40C-203ENST00000535977 PTMAP06454 111 aaKnown RBP21.52■■□□□ 1.04
RAB40C-203ENST00000535977 PRPF40AO75400 957 aaKnown RBP21.51■■□□□ 1.03
RAB40C-203ENST00000535977 GTF2F1P35269 517 aaKnown RBP eCLIP21.51■■□□□ 1.034e-9■■■■■ 33
RAB40C-203ENST00000535977 PKP1Q13835 747 aa21.51■■□□□ 1.03
RAB40C-203ENST00000535977 SYCE3A1L190 88 aa21.51■■□□□ 1.03
RAB40C-203ENST00000535977 SPDYE4A6NLX3 237 aa21.51■■□□□ 1.03
RAB40C-203ENST00000535977 ABCC6O95255 1503 aa21.51■■□□□ 1.03
RAB40C-203ENST00000535977 BRD1O95696 1058 aa21.5■■□□□ 1.03
RAB40C-203ENST00000535977 ECHDC1Q9NTX5 307 aa21.5■■□□□ 1.03
RAB40C-203ENST00000535977 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
RAB40C-203ENST00000535977 RNF214Q8ND24 703 aa21.5■■□□□ 1.03
RAB40C-203ENST00000535977 GRM8O00222 908 aa21.49■■□□□ 1.03
RAB40C-203ENST00000535977 HMGN5P82970 282 aaKnown RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 IPO4Q8TEX9 1081 aaKnown RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 TMEM63CQ9P1W3 806 aa21.49■■□□□ 1.03
RAB40C-203ENST00000535977 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
RAB40C-203ENST00000535977 ZNF335Q9H4Z2 1342 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 IGSF3O75054 1194 aa21.49■■□□□ 1.03
RAB40C-203ENST00000535977 TATP17735 454 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 LSG1Q9H089 658 aaKnown RBP21.49■■□□□ 1.03
RAB40C-203ENST00000535977 ALS2Q96Q42 1657 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 IFIT2P09913 472 aaKnown RBP21.48■■□□□ 1.03
RAB40C-203ENST00000535977 PROSER3Q2NL68 480 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 SLC52A2Q9HAB3 445 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 VGLL3A8MV65 326 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 MBD3O95983 291 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 ZNF790Q6PG37 636 aa21.48■■□□□ 1.03
RAB40C-203ENST00000535977 HIP1O00291 1037 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms