RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 GBP4Q96PP9 640 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 NRAPQ86VF7 1730 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 TEFQ10587 303 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 PI4KAP2A4QPH2 592 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 CWF19L2Q2TBE0 894 aaKnown RBP11.03□□□□□ -0.64
SF3B2-216ENST00000534765 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 PI4KAP1Q8N8J0 262 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 DDX54Q8TDD1 881 aaKnown RBP11.03□□□□□ -0.64
SF3B2-216ENST00000534765 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
SF3B2-216ENST00000534765 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 ABCC6O95255 1503 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 RWDD1Q9H446 243 aaPredicted RBP11.02□□□□□ -0.65
SF3B2-216ENST00000534765 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 GSPT1P15170 499 aaKnown RBP11.02□□□□□ -0.65
SF3B2-216ENST00000534765 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 KAZALD1Q96I82 304 aa11.02□□□□□ -0.65
SF3B2-216ENST00000534765 PTPRCP08575 1304 aa11.01□□□□□ -0.65
SF3B2-216ENST00000534765 CCDC94Q9BW85 323 aaPredicted RBP11.01□□□□□ -0.65
SF3B2-216ENST00000534765 MYL6BP14649 208 aa11.01□□□□□ -0.65
SF3B2-216ENST00000534765 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
SF3B2-216ENST00000534765 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
SF3B2-216ENST00000534765 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
SF3B2-216ENST00000534765 ANKRD45Q5TZF3 282 aa11.01□□□□□ -0.65
SF3B2-216ENST00000534765 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
SF3B2-216ENST00000534765 CCDC30Q5VVM6 783 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 SLC4A9Q96Q91 983 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 TBC1D2Q9BYX2 928 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 NBPF26B4DH59 902 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 AIMP1Q12904 312 aaKnown RBP11□□□□□ -0.65
SF3B2-216ENST00000534765 NBPF14Q5TI25 921 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
SF3B2-216ENST00000534765 PTF1AQ7RTS3 328 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 NBPF15Q8N660 670 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 TMEM51Q9NW97 253 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 LRRFIP2Q9Y608 721 aaKnown RBP11□□□□□ -0.65
SF3B2-216ENST00000534765 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
SF3B2-216ENST00000534765 DISP2A7MBM2 1401 aa11□□□□□ -0.65
SF3B2-216ENST00000534765 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 EXOC6BQ9Y2D4 811 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 ARFGEF2Q9Y6D5 1785 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 KAT6BQ8WYB5 2073 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 IFNL2Q8IZJ0 200 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 CHMP4CQ96CF2 233 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
SF3B2-216ENST00000534765 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 ASAP1Q9ULH1 1129 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 DYNC1I1O14576 645 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 NUTM2AQ8IVF1 878 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 FOXD4L4Q8WXT5 416 aaPredicted RBP10.98□□□□□ -0.65
SF3B2-216ENST00000534765 MAP3K2Q9Y2U5 619 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
SF3B2-216ENST00000534765 LAMB4A4D0S4 1761 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
SF3B2-216ENST00000534765 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 DOT1LQ8TEK3 1739 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 FSD2A1L4K1 749 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 A1BGP04217 495 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 EPHA10Q5JZY3 1008 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 STK31Q9BXU1 1019 aa10.97□□□□□ -0.65
SF3B2-216ENST00000534765 AFDNP55196 1824 aaKnown RBP10.96□□□□□ -0.65
SF3B2-216ENST00000534765 IL2RBP14784 551 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 CHAF1AQ13111 956 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-216ENST00000534765 SASS6Q6UVJ0 657 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 DCAF5Q96JK2 942 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 BABAM1Q9NWV8 329 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 TJP1Q07157 1748 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-216ENST00000534765 KIF20AO95235 890 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 KLHDC4Q8TBB5 520 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 SPG7Q9UQ90 795 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 LRP6O75581 1613 aa10.96□□□□□ -0.65
SF3B2-216ENST00000534765 PTMSP20962 102 aa10.96□□□□□ -0.66
SF3B2-216ENST00000534765 BRD2P25440 801 aaKnown RBP10.96□□□□□ -0.66
SF3B2-216ENST00000534765 CAVIN1Q6NZI2 390 aaKnown RBP10.96□□□□□ -0.66
SF3B2-216ENST00000534765 PIGBQ92521 554 aa10.96□□□□□ -0.66
SF3B2-216ENST00000534765 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 GTPBP4Q9BZE4 634 aaKnown RBP10.95□□□□□ -0.66
SF3B2-216ENST00000534765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.662e-10■■■■□ 21.4
SF3B2-216ENST00000534765 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 PDCL2Q8N4E4 241 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 IL25Q9H293 177 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 COPS6Q7L5N1 327 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 XAGE3Q8WTP9 111 aa10.95□□□□□ -0.66
SF3B2-216ENST00000534765 EVA1CP58658 441 aa10.94□□□□□ -0.66
SF3B2-216ENST00000534765 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms