RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 ZHX3Q9H4I2 956 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 WASHC2CQ9Y4E1 1318 aa7.75□□□□□ -1.17
CHEK1-216ENST00000534070 DIP2CQ9Y2E4 1556 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 USP17L5A8MUK1 530 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 SKIP12755 728 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 GUCA2AQ02747 115 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 NCOA4Q13772 614 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 BRD3Q15059 726 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 MRFAP1L1Q96HT8 127 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 FRMD4BQ9Y2L6 1034 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 SETD1BQ9UPS6 1966 aaKnown RBP7.74□□□□□ -1.17
CHEK1-216ENST00000534070 DPYDQ12882 1025 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 ICE2Q659A1 982 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 GTF3C2Q8WUA4 911 aaPredicted RBP7.74□□□□□ -1.17
CHEK1-216ENST00000534070 SENP7Q9BQF6 1050 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 QTRT2Q9H974 415 aaKnown RBP7.74□□□□□ -1.17
CHEK1-216ENST00000534070 DNMT1P26358 1616 aaKnown RBP7.74□□□□□ -1.17
CHEK1-216ENST00000534070 PRSS47A8MTI9 375 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 ICMTO60725 284 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
CHEK1-216ENST00000534070 ARMC3Q5W041 872 aa7.74□□□□□ -1.17
CHEK1-216ENST00000534070 PRAG1Q86YV5 1406 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 BPNT1O95861 308 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 FGRP09769 529 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 SLC4A8Q2Y0W8 1093 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 AXDND1Q5T1B0 1012 aaPredicted RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 GMLQ99445 158 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 NEO1Q92859 1461 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 PREX1Q8TCU6 1659 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 CACTIN-AS1Q8N1I8 211 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 PURBQ96QR8 312 aaKnown RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 POLR1AO95602 1720 aaPredicted RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 XRCC5P13010 732 aaKnown RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 SUGP1Q8IWZ8 645 aaKnown RBP7.73□□□□□ -1.17
CHEK1-216ENST00000534070 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
CHEK1-216ENST00000534070 TKFCQ3LXA3 575 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 NAP1L4Q99733 375 aaKnown RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SH3BP1Q9Y3L3 701 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 XIRP1Q702N8 1843 aaKnown RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 TCERG1O14776 1098 aaKnown RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SIM2Q14190 667 aaPredicted RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 HDAC9Q9UKV0 1011 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 PRDM15P57071 1507 aaPredicted RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 CCDC18Q5T9S5 1454 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SHANK2Q9UPX8 1470 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 CEP162Q5TB80 1403 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SORBS3O60504 671 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 CT47B1P0C2W7 299 aaPredicted RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 GNL2Q13823 731 aaKnown RBP7.72□□□□□ -1.17
CHEK1-216ENST00000534070 SLC43A3Q8NBI5 491 aa7.72□□□□□ -1.17
CHEK1-216ENST00000534070 CAMSAP1Q5T5Y3 1602 aa7.71□□□□□ -1.17
CHEK1-216ENST00000534070 FMNL1O95466 1100 aaPredicted RBP7.71□□□□□ -1.17
CHEK1-216ENST00000534070 KIF12Q96FN5 646 aa7.71□□□□□ -1.17
CHEK1-216ENST00000534070 ZSCAN29Q8IWY8 852 aaPredicted RBP7.71□□□□□ -1.18
CHEK1-216ENST00000534070 PLPP6Q8IY26 295 aa7.71□□□□□ -1.18
CHEK1-216ENST00000534070 VPS37AQ8NEZ2 397 aa7.71□□□□□ -1.18
CHEK1-216ENST00000534070 C12orf49Q9H741 205 aa7.71□□□□□ -1.18
CHEK1-216ENST00000534070 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
CHEK1-216ENST00000534070 LDHBP07195 334 aaKnown RBP7.7□□□□□ -1.18
CHEK1-216ENST00000534070 TRAPPC10P48553 1259 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 NAA30Q147X3 362 aaPredicted RBP7.7□□□□□ -1.18
CHEK1-216ENST00000534070 NR6A1Q15406 480 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 KSR2Q6VAB6 950 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 ZFYVE16Q7Z3T8 1539 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 EHBP1L1Q8N3D4 1523 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 ESYT3A0FGR9 886 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 C1QTNF12Q5T7M4 302 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 MUC3BQ9H195 1237 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 ISY1Q9ULR0 285 aaKnown RBP7.7□□□□□ -1.18
CHEK1-216ENST00000534070 SPTLC1O15269 473 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 SCGB1D2O95969 90 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 LMNB1P20700 586 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 CHMP4BP1P59074 171 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 SH3TC2Q8TF17 1288 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 KNDC1Q76NI1 1749 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 C3P01024 1663 aa7.7□□□□□ -1.18
CHEK1-216ENST00000534070 SUPT6HQ7KZ85 1726 aaKnown RBP7.69□□□□□ -1.18
CHEK1-216ENST00000534070 RGL4Q8IZJ4 473 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 UBR7Q8N806 425 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 BRINP2Q9C0B6 783 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 AVENQ9NQS1 362 aaPredicted RBP7.69□□□□□ -1.18
CHEK1-216ENST00000534070 KIAA1024Q9UPX6 916 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 STRCQ7RTU9 1775 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 LMTK3Q96Q04 1460 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 SCP2P22307 547 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 KCTD2Q14681 263 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 TMC1Q8TDI8 760 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 PRPF3O43395 683 aaKnown RBP7.69□□□□□ -1.18
CHEK1-216ENST00000534070 C21orf2O43822 256 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 DSG3P32926 999 aa7.69□□□□□ -1.18
CHEK1-216ENST00000534070 BRDTQ58F21 947 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms