RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RGL2O15211 777 aa24.94■■□□□ 1.58
SSH3-209ENST00000532600 PDE6BP35913 854 aa24.94■■□□□ 1.58
SSH3-209ENST00000532600 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
SSH3-209ENST00000532600 TRIM35Q9UPQ4 493 aa24.94■■□□□ 1.58
SSH3-209ENST00000532600 RNF181Q9P0P0 153 aa24.93■■□□□ 1.58
SSH3-209ENST00000532600 NUP98P52948 1817 aa24.92■■□□□ 1.58
SSH3-209ENST00000532600 TTLL7Q6ZT98 887 aa24.92■■□□□ 1.58
SSH3-209ENST00000532600 NGEFQ8N5V2 710 aa24.92■■□□□ 1.58
SSH3-209ENST00000532600 ZNF622Q969S3 477 aaKnown RBP eCLIP24.92■■□□□ 1.58
SSH3-209ENST00000532600 RUNDC1Q96C34 613 aa24.92■■□□□ 1.58
SSH3-209ENST00000532600 NIP7Q9Y221 180 aaKnown RBP eCLIP24.92■■□□□ 1.58
SSH3-209ENST00000532600 ZNF652Q9Y2D9 606 aa24.92■■□□□ 1.58
SSH3-209ENST00000532600 SLX4Q8IY92 1834 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 NFKBIEO00221 500 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 SRGNP10124 158 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 NEUROD2Q15784 382 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 LRP10Q7Z4F1 713 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 NBPF5PQ86XG9 351 aaPredicted RBP24.91■■□□□ 1.58
SSH3-209ENST00000532600 NMRK2Q9NPI5 230 aa24.91■■□□□ 1.58
SSH3-209ENST00000532600 CACNA1SQ13698 1873 aa24.9■■□□□ 1.58
SSH3-209ENST00000532600 ST5P78524 1137 aa24.9■■□□□ 1.58
SSH3-209ENST00000532600 PDIA6Q15084 440 aa24.9■■□□□ 1.58
SSH3-209ENST00000532600 PDZRN3Q9UPQ7 1066 aa24.9■■□□□ 1.58
SSH3-209ENST00000532600 ARFGEF2Q9Y6D5 1785 aa24.9■■□□□ 1.58
SSH3-209ENST00000532600 MYL6BP14649 208 aa24.89■■□□□ 1.58
SSH3-209ENST00000532600 LMOD3Q0VAK6 560 aa24.89■■□□□ 1.58
SSH3-209ENST00000532600 WDR43Q15061 677 aaKnown RBP eCLIP24.89■■□□□ 1.58
SSH3-209ENST00000532600 BABAM1Q9NWV8 329 aa24.89■■□□□ 1.58
SSH3-209ENST00000532600 MAP3K15Q6ZN16 1313 aa24.88■■□□□ 1.57
SSH3-209ENST00000532600 TNRC6CQ9HCJ0 1690 aaKnown RBP24.88■■□□□ 1.57
SSH3-209ENST00000532600 FER1L6Q2WGJ9 1857 aa24.88■■□□□ 1.57
SSH3-209ENST00000532600 CCDC88AQ3V6T2 1871 aa24.88■■□□□ 1.57
SSH3-209ENST00000532600 KLRG2A4D1S0 409 aaPredicted RBP24.87■■□□□ 1.57
SSH3-209ENST00000532600 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
SSH3-209ENST00000532600 ERVV-1B6SEH8 477 aa24.87■■□□□ 1.57
SSH3-209ENST00000532600 C21orf2O43822 256 aa24.87■■□□□ 1.57
SSH3-209ENST00000532600 PROSER3Q2NL68 480 aa24.87■■□□□ 1.57
SSH3-209ENST00000532600 STYK1Q6J9G0 422 aa24.87■■□□□ 1.57
SSH3-209ENST00000532600 ZNF219Q9P2Y4 722 aaPredicted RBP24.87■■□□□ 1.57
SSH3-209ENST00000532600 ERBB4Q15303 1308 aa24.86■■□□□ 1.57
SSH3-209ENST00000532600 CHL1O00533 1208 aa24.86■■□□□ 1.57
SSH3-209ENST00000532600 NPHP1O15259 732 aa24.86■■□□□ 1.57
SSH3-209ENST00000532600 KRT24Q2M2I5 525 aa24.86■■□□□ 1.57
SSH3-209ENST00000532600 TIAM2Q8IVF5 1701 aa24.86■■□□□ 1.57
SSH3-209ENST00000532600 LMNB1P20700 586 aa24.85■■□□□ 1.57
SSH3-209ENST00000532600 TPTE2Q6XPS3 522 aa24.85■■□□□ 1.57
SSH3-209ENST00000532600 MASTLQ96GX5 879 aa24.85■■□□□ 1.57
SSH3-209ENST00000532600 ZBTB3Q9H5J0 574 aa24.85■■□□□ 1.57
SSH3-209ENST00000532600 UBN2Q6ZU65 1347 aa24.85■■□□□ 1.57
SSH3-209ENST00000532600 ABCC12Q96J65 1359 aa24.84■■□□□ 1.57
SSH3-209ENST00000532600 ANXA1P04083 346 aa24.84■■□□□ 1.57
SSH3-209ENST00000532600 EIF2S2P20042 333 aaKnown RBP24.84■■□□□ 1.57
SSH3-209ENST00000532600 PRPF40BQ6NWY9 871 aaKnown RBP24.84■■□□□ 1.57
SSH3-209ENST00000532600 C7orf43Q8WVR3 580 aa24.83■■□□□ 1.57
SSH3-209ENST00000532600 CNKSR1Q969H4 720 aa24.83■■□□□ 1.57
SSH3-209ENST00000532600 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
SSH3-209ENST00000532600 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
SSH3-209ENST00000532600 CEP350Q5VT06 3117 aa24.81■■□□□ 1.56
SSH3-209ENST00000532600 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
SSH3-209ENST00000532600 ZNF34Q8IZ26 560 aa24.81■■□□□ 1.56
SSH3-209ENST00000532600 GPTP24298 496 aa24.8■■□□□ 1.56
SSH3-209ENST00000532600 SUSD4Q5VX71 490 aa24.8■■□□□ 1.56
SSH3-209ENST00000532600 NECTIN2Q92692 538 aa24.8■■□□□ 1.56
SSH3-209ENST00000532600 DICER1Q9UPY3 1922 aaKnown RBP24.8■■□□□ 1.56
SSH3-209ENST00000532600 ZC3H4Q9UPT8 1303 aaKnown RBP24.8■■□□□ 1.56
SSH3-209ENST00000532600 NPR1P16066 1061 aa24.79■■□□□ 1.56
SSH3-209ENST00000532600 ERFEQ4G0M1 354 aa24.79■■□□□ 1.56
SSH3-209ENST00000532600 GIGYF2Q6Y7W6 1299 aaKnown RBP24.79■■□□□ 1.56
SSH3-209ENST00000532600 LAS1LQ9Y4W2 734 aaKnown RBP24.79■■□□□ 1.56
SSH3-209ENST00000532600 TOMM70O94826 608 aa24.78■■□□□ 1.56
SSH3-209ENST00000532600 HSPA6P17066 643 aa24.78■■□□□ 1.56
SSH3-209ENST00000532600 KDM2BQ8NHM5 1336 aa24.78■■□□□ 1.56
SSH3-209ENST00000532600 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
SSH3-209ENST00000532600 IBTKQ9P2D0 1353 aaPredicted RBP24.78■■□□□ 1.56
SSH3-209ENST00000532600 APAF1O14727 1248 aa24.77■■□□□ 1.56
SSH3-209ENST00000532600 OLFM4Q6UX06 510 aa24.77■■□□□ 1.56
SSH3-209ENST00000532600 RRAGCQ9HB90 399 aa24.77■■□□□ 1.56
SSH3-209ENST00000532600 NTSR2O95665 410 aa24.76■■□□□ 1.55
SSH3-209ENST00000532600 CRY2Q49AN0 593 aa24.76■■□□□ 1.55
SSH3-209ENST00000532600 GLTPD2A6NH11 291 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 ZNF853P0CG23 659 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 COPS6Q7L5N1 327 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 CFAP44Q96MT7 982 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 NYXQ9GZU5 481 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 TAOK3Q9H2K8 898 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 RIC1Q4ADV7 1423 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
SSH3-209ENST00000532600 C3orf67Q6ZVT6 689 aa24.74■■□□□ 1.55
SSH3-209ENST00000532600 XAGE3Q8WTP9 111 aa24.74■■□□□ 1.55
SSH3-209ENST00000532600 MBIPQ9NS73 344 aa24.74■■□□□ 1.55
SSH3-209ENST00000532600 SNED1Q8TER0 1413 aa24.74■■□□□ 1.55
SSH3-209ENST00000532600 GTF2E1P29083 439 aaPredicted RBP24.73■■□□□ 1.55
SSH3-209ENST00000532600 DDX21Q9NR30 783 aaKnown RBP eCLIP24.73■■□□□ 1.55
SSH3-209ENST00000532600 POTECB2RU33 542 aa24.72■■□□□ 1.55
SSH3-209ENST00000532600 SLC51AQ86UW1 340 aa24.72■■□□□ 1.55
SSH3-209ENST00000532600 RBM46Q8TBY0 533 aaKnown RBP24.72■■□□□ 1.55
SSH3-209ENST00000532600 CHPF2Q9P2E5 772 aa24.72■■□□□ 1.55
SSH3-209ENST00000532600 AIMP1Q12904 312 aaKnown RBP24.71■■□□□ 1.55
SSH3-209ENST00000532600 SOGA3Q5TF21 947 aa24.71■■□□□ 1.55
SSH3-209ENST00000532600 WDR90Q96KV7 1748 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms