RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 OGFOD1Q8N543 542 aa7.23□□□□□ -1.25
ATM-217ENST00000531957 ZDHHC1Q8WTX9 485 aa7.23□□□□□ -1.25
ATM-217ENST00000531957 ZNF594Q96JF6 807 aaPredicted RBP7.23□□□□□ -1.25
ATM-217ENST00000531957 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
ATM-217ENST00000531957 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
ATM-217ENST00000531957 EPHA4P54764 986 aa7.22□□□□□ -1.25
ATM-217ENST00000531957 CALR3Q96L12 384 aaKnown RBP7.22□□□□□ -1.25
ATM-217ENST00000531957 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
ATM-217ENST00000531957 A6NJR5 290 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 TXLNAP40222 546 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 GATA4P43694 442 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 BICDL1Q6ZP65 573 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 SLC9A9Q8IVB4 645 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 MARK1Q9P0L2 795 aa7.21□□□□□ -1.26
ATM-217ENST00000531957 MAFBQ9Y5Q3 323 aaPredicted RBP7.21□□□□□ -1.26
ATM-217ENST00000531957 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
ATM-217ENST00000531957 PALM3A6NDB9 673 aaPredicted RBP7.2□□□□□ -1.26
ATM-217ENST00000531957 ELOA3DA6NLF2 546 aaPredicted RBP7.2□□□□□ -1.26
ATM-217ENST00000531957 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 ALAS2P22557 587 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 ELOA3BQ3SY89 546 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 PRRT3Q5FWE3 981 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 SH3PXD2AQ5TCZ1 1133 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 ELOA3Q8NG57 546 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 ZIC5Q96T25 663 aa7.2□□□□□ -1.26
ATM-217ENST00000531957 GPC6Q9Y625 555 aaPredicted RBP7.2□□□□□ -1.26
ATM-217ENST00000531957 EFSO43281 561 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
ATM-217ENST00000531957 TSEN2Q8NCE0 465 aaKnown RBP7.19□□□□□ -1.26
ATM-217ENST00000531957 L3MBTL2Q969R5 705 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 TRIM11Q96F44 468 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 PLVAPQ9BX97 442 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 TSPAN10Q9H1Z9 355 aaPredicted RBP7.19□□□□□ -1.26
ATM-217ENST00000531957 KLF15Q9UIH9 416 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 ZNF232Q9UNY5 417 aa7.19□□□□□ -1.26
ATM-217ENST00000531957 LGR5O75473 907 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 APBA3O96018 575 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 RASA1P20936 1047 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 NOS2P35228 1153 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 SEMA6BQ9H3T3 888 aa7.18□□□□□ -1.26
ATM-217ENST00000531957 ZNF777Q9ULD5 760 aaPredicted RBP7.18□□□□□ -1.26
ATM-217ENST00000531957 DKK1O94907 266 aa7.17□□□□□ -1.26
ATM-217ENST00000531957 DOC2BQ14184 412 aa7.17□□□□□ -1.26
ATM-217ENST00000531957 ZMYM1Q5SVZ6 1142 aa7.17□□□□□ -1.26
ATM-217ENST00000531957 SIX5Q8N196 739 aa7.17□□□□□ -1.26
ATM-217ENST00000531957 NACC1Q96RE7 527 aa7.17□□□□□ -1.26
ATM-217ENST00000531957 LMOD1P29536 600 aaPredicted RBP7.16□□□□□ -1.26
ATM-217ENST00000531957 NEUROD1Q13562 356 aa7.16□□□□□ -1.26
ATM-217ENST00000531957 TEAD4Q15561 434 aa7.16□□□□□ -1.26
ATM-217ENST00000531957 CRTC2Q53ET0 693 aaPredicted RBP7.16□□□□□ -1.26
ATM-217ENST00000531957 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
ATM-217ENST00000531957 SERTM1A2A2V5 107 aa7.15□□□□□ -1.26
ATM-217ENST00000531957 EML1O00423 815 aa7.15□□□□□ -1.26
ATM-217ENST00000531957 SIN3BO75182 1162 aa7.15□□□□□ -1.26
ATM-217ENST00000531957 LRRC69Q6ZNQ3 347 aa7.15□□□□□ -1.26
ATM-217ENST00000531957 SYT9Q86SS6 491 aa7.15□□□□□ -1.26
ATM-217ENST00000531957 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 KANK4Q5T7N3 995 aaPredicted RBP7.14□□□□□ -1.27
ATM-217ENST00000531957 GAS2L2Q8NHY3 880 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 NEUROD4Q9HD90 331 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 STRN4Q9NRL3 753 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 HCN4Q9Y3Q4 1203 aa7.14□□□□□ -1.27
ATM-217ENST00000531957 RBM19Q9Y4C8 960 aaKnown RBP7.14□□□□□ -1.27
ATM-217ENST00000531957 M0R2N6 131 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 ITGB7P26010 798 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 PSMA6P60900 246 aaKnown RBP7.13□□□□□ -1.27
ATM-217ENST00000531957 PTK7Q13308 1070 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 LARP1Q6PKG0 1096 aaKnown RBP7.13□□□□□ -1.27
ATM-217ENST00000531957 RHPN1Q8TCX5 695 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 TNFRSF25Q93038 417 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 PSMG3-AS1Q96PY0 264 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 MDFIQ99750 246 aa7.13□□□□□ -1.27
ATM-217ENST00000531957 SCO2A0A1W2PP80 73 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L10C9JJH3 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L12C9JPN9 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L21D6R901 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 C21orf2O43822 256 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 PPP1R12BO60237 982 aaPredicted RBP7.12□□□□□ -1.27
ATM-217ENST00000531957 SEC13P55735 322 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 USP17L24Q0WX57 530 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 DPYDQ12882 1025 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 RSPO4Q2I0M5 234 aaPredicted RBP7.12□□□□□ -1.27
ATM-217ENST00000531957 CDCA8Q53HL2 280 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 CHMP7Q8WUX9 453 aaPredicted RBP7.12□□□□□ -1.27
ATM-217ENST00000531957 C7orf43Q8WVR3 580 aa7.12□□□□□ -1.27
ATM-217ENST00000531957 SCG3Q8WXD2 468 aaKnown RBP7.12□□□□□ -1.27
ATM-217ENST00000531957 HSH2DQ96JZ2 352 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms