RNA–Protein interactions for RNA: ENST00000531608.1

SNX19-210, Transcript of sorting nexin 19, humanhuman

TSL 4

Gene SNX19, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-210ENST00000531608 COL11A2P13942 1736 aaPredicted RBP23.99■■□□□ 1.43
SNX19-210ENST00000531608 GAS2L2Q8NHY3 880 aa23.99■■□□□ 1.43
SNX19-210ENST00000531608 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
SNX19-210ENST00000531608 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
SNX19-210ENST00000531608 U2SURPO15042 1029 aaKnown RBP23.97■■□□□ 1.43
SNX19-210ENST00000531608 CC2D1BQ5T0F9 858 aaKnown RBP23.97■■□□□ 1.43
SNX19-210ENST00000531608 DZIP3Q86Y13 1208 aaKnown RBP23.97■■□□□ 1.43
SNX19-210ENST00000531608 SLX4Q8IY92 1834 aa23.97■■□□□ 1.43
SNX19-210ENST00000531608 AIDAQ96BJ3 306 aa23.97■■□□□ 1.43
SNX19-210ENST00000531608 L3MBTL3Q96JM7 780 aaPredicted RBP23.97■■□□□ 1.43
SNX19-210ENST00000531608 PASKQ96RG2 1323 aa23.97■■□□□ 1.43
SNX19-210ENST00000531608 PRDM10Q9NQV6 1147 aa23.97■■□□□ 1.43
SNX19-210ENST00000531608 TMEM88BA6NKF7 163 aa23.95■■□□□ 1.42
SNX19-210ENST00000531608 CTCFP49711 727 aaPredicted RBP23.95■■□□□ 1.42
SNX19-210ENST00000531608 CCDC93Q567U6 631 aa23.95■■□□□ 1.42
SNX19-210ENST00000531608 NBPF5PQ86XG9 351 aaPredicted RBP23.95■■□□□ 1.42
SNX19-210ENST00000531608 VEGFBP49765 207 aa23.94■■□□□ 1.42
SNX19-210ENST00000531608 EAPPQ56P03 285 aaPredicted RBP23.94■■□□□ 1.42
SNX19-210ENST00000531608 C7orf43Q8WVR3 580 aa23.94■■□□□ 1.42
SNX19-210ENST00000531608 BTBD11A6QL63 1104 aa23.93■■□□□ 1.42
SNX19-210ENST00000531608 ITGBL1O95965 494 aaPredicted RBP23.93■■□□□ 1.42
SNX19-210ENST00000531608 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
SNX19-210ENST00000531608 CLEC11AQ9Y240 323 aa23.93■■□□□ 1.42
SNX19-210ENST00000531608 KCNQ3O43525 872 aa23.92■■□□□ 1.42
SNX19-210ENST00000531608 NPR1P16066 1061 aa23.92■■□□□ 1.42
SNX19-210ENST00000531608 FKBP4Q02790 459 aaKnown RBP eCLIP23.92■■□□□ 1.42
SNX19-210ENST00000531608 CLEC4GQ6UXB4 293 aa23.92■■□□□ 1.42
SNX19-210ENST00000531608 KIF7Q2M1P5 1343 aa23.91■■□□□ 1.42
SNX19-210ENST00000531608 PER1O15534 1290 aaPredicted RBP23.91■■□□□ 1.42
SNX19-210ENST00000531608 PIP4K2AP48426 406 aaPredicted RBP23.91■■□□□ 1.42
SNX19-210ENST00000531608 ZNF277Q9NRM2 450 aaPredicted RBP23.91■■□□□ 1.42
SNX19-210ENST00000531608 HACL1Q9UJ83 578 aa23.91■■□□□ 1.42
SNX19-210ENST00000531608 ZNF652Q9Y2D9 606 aa23.91■■□□□ 1.42
SNX19-210ENST00000531608 USP16Q9Y5T5 823 aa23.91■■□□□ 1.42
SNX19-210ENST00000531608 SCN4AP35499 1836 aa23.89■■□□□ 1.42
SNX19-210ENST00000531608 ZNF541Q9H0D2 1346 aa23.89■■□□□ 1.42
SNX19-210ENST00000531608 TPTE2Q6XPS3 522 aa23.89■■□□□ 1.41
SNX19-210ENST00000531608 RTKN2Q8IZC4 609 aa23.89■■□□□ 1.41
SNX19-210ENST00000531608 WBP1LQ9NX94 342 aa23.89■■□□□ 1.41
SNX19-210ENST00000531608 CACNA1SQ13698 1873 aa23.89■■□□□ 1.41
SNX19-210ENST00000531608 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
SNX19-210ENST00000531608 EPHX2P34913 555 aa23.88■■□□□ 1.41
SNX19-210ENST00000531608 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
SNX19-210ENST00000531608 KLRG2A4D1S0 409 aaPredicted RBP23.87■■□□□ 1.41
SNX19-210ENST00000531608 LBX1P52954 281 aa23.87■■□□□ 1.41
SNX19-210ENST00000531608 PNMA8AQ86V59 439 aaPredicted RBP23.87■■□□□ 1.41
SNX19-210ENST00000531608 ARFGEF2Q9Y6D5 1785 aa23.87■■□□□ 1.41
SNX19-210ENST00000531608 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
SNX19-210ENST00000531608 DEFB115Q30KQ5 88 aa23.86■■□□□ 1.41
SNX19-210ENST00000531608 OLFM4Q6UX06 510 aa23.86■■□□□ 1.41
SNX19-210ENST00000531608 CNTROBQ8N137 903 aa23.86■■□□□ 1.41
SNX19-210ENST00000531608 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
SNX19-210ENST00000531608 PRAMEF22A3QJZ6 481 aa23.85■■□□□ 1.41
SNX19-210ENST00000531608 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
SNX19-210ENST00000531608 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
SNX19-210ENST00000531608 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
SNX19-210ENST00000531608 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
SNX19-210ENST00000531608 BCORQ6W2J9 1755 aa23.84■■□□□ 1.41
SNX19-210ENST00000531608 FAM177BA6PVY3 158 aa23.84■■□□□ 1.41
SNX19-210ENST00000531608 ALDH1B1P30837 517 aa23.84■■□□□ 1.41
SNX19-210ENST00000531608 MAP1SQ66K74 1059 aaPredicted RBP23.84■■□□□ 1.41
SNX19-210ENST00000531608 SYNE4Q8N205 404 aa23.84■■□□□ 1.41
SNX19-210ENST00000531608 RASSF10A6NK89 507 aa23.83■■□□□ 1.41
SNX19-210ENST00000531608 FZD9O00144 591 aa23.83■■□□□ 1.41
SNX19-210ENST00000531608 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
SNX19-210ENST00000531608 IARSP41252 1262 aaKnown RBP23.83■■□□□ 1.41
SNX19-210ENST00000531608 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
SNX19-210ENST00000531608 GPC2Q8N158 579 aa23.82■■□□□ 1.4
SNX19-210ENST00000531608 RGL2O15211 777 aa23.81■■□□□ 1.4
SNX19-210ENST00000531608 MAP2K1Q02750 393 aaPredicted RBP23.81■■□□□ 1.4
SNX19-210ENST00000531608 JDP2Q8WYK2 163 aa23.81■■□□□ 1.4
SNX19-210ENST00000531608 ABT1Q9ULW3 272 aaKnown RBP23.81■■□□□ 1.4
SNX19-210ENST00000531608 RTF1Q92541 710 aaKnown RBP23.8■■□□□ 1.4
SNX19-210ENST00000531608 WDR33Q9C0J8 1336 aaKnown RBP23.8■■□□□ 1.4
SNX19-210ENST00000531608 NBPF26B4DH59 902 aa23.79■■□□□ 1.4
SNX19-210ENST00000531608 HSPA8P11142 646 aaKnown RBP23.79■■□□□ 1.4
SNX19-210ENST00000531608 NBPF10Q6P3W6 841 aaKnown RBP23.79■■□□□ 1.4
SNX19-210ENST00000531608 NBPF15Q8N660 670 aa23.79■■□□□ 1.4
SNX19-210ENST00000531608 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
SNX19-210ENST00000531608 MCM10Q7L590 875 aa23.78■■□□□ 1.4
SNX19-210ENST00000531608 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
SNX19-210ENST00000531608 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
SNX19-210ENST00000531608 HLFQ16534 295 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 ABHD8Q96I13 439 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 CFAP53Q96M91 514 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 PSMD1Q99460 953 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 GJA3Q9Y6H8 435 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 ADAMTSL1Q8N6G6 1762 aa23.77■■□□□ 1.4
SNX19-210ENST00000531608 DDX21Q9NR30 783 aaKnown RBP eCLIP23.76■■□□□ 1.39
SNX19-210ENST00000531608 LMOD1P29536 600 aaPredicted RBP23.75■■□□□ 1.39
SNX19-210ENST00000531608 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
SNX19-210ENST00000531608 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
SNX19-210ENST00000531608 NYXQ9GZU5 481 aa23.74■■□□□ 1.39
SNX19-210ENST00000531608 CRY2Q49AN0 593 aa23.73■■□□□ 1.39
SNX19-210ENST00000531608 PAXIP1Q6ZW49 1069 aaPredicted RBP23.73■■□□□ 1.39
SNX19-210ENST00000531608 DCTN1Q14203 1278 aa23.72■■□□□ 1.39
SNX19-210ENST00000531608 BEGAINQ9BUH8 593 aa23.72■■□□□ 1.39
SNX19-210ENST00000531608 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
SNX19-210ENST00000531608 ECE1P42892 770 aa23.71■■□□□ 1.39
SNX19-210ENST00000531608 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms