RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 NEURL4Q96JN8 1562 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 CCZ1BP86790 482 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 CCZ1P86791 482 aaPredicted RBP16.67■□□□□ 0.26
PCF11-204ENST00000530660 FAM173BQ6P4H8 233 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 DACT1Q9NYF0 836 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 CCDC172P0C7W6 258 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
PCF11-204ENST00000530660 L2HGDHQ9H9P8 463 aa16.67■□□□□ 0.26
PCF11-204ENST00000530660 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 ATP2B1P20020 1258 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 FOXR1Q6PIV2 292 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
PCF11-204ENST00000530660 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 FBLN1P23142 703 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 PDE1AP54750 535 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
PCF11-204ENST00000530660 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 VWDEQ8N2E2 1590 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 FYB1O15117 783 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
PCF11-204ENST00000530660 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 UBXN6Q9BZV1 441 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 ORC3Q9UBD5 711 aaPredicted RBP16.65■□□□□ 0.26
PCF11-204ENST00000530660 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
PCF11-204ENST00000530660 RILPL2Q969X0 211 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 ADAM21Q9UKJ8 722 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.65■□□□□ 0.264e-7■■■□□ 15.7
PCF11-204ENST00000530660 ANAPC15P60006 121 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 UBXN4Q92575 508 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 IL25Q9H293 177 aa16.65■□□□□ 0.26
PCF11-204ENST00000530660 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
PCF11-204ENST00000530660 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 CCDC93Q567U6 631 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 HMOX1P09601 288 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
PCF11-204ENST00000530660 DNAJC21Q5F1R6 531 aaKnown RBP16.63■□□□□ 0.25
PCF11-204ENST00000530660 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 MTMR6Q9Y217 621 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
PCF11-204ENST00000530660 LARGE1O95461 756 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 MAGEA9P43362 315 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 TWISTNBQ3B726 338 aaPredicted RBP16.63■□□□□ 0.25
PCF11-204ENST00000530660 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 AK7Q96M32 723 aa16.63■□□□□ 0.25
PCF11-204ENST00000530660 CPA1P15085 419 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 ACTN2P35609 894 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 AK2P54819 239 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
PCF11-204ENST00000530660 CXorf56Q9H5V9 222 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
PCF11-204ENST00000530660 FCHSD2O94868 740 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 GJB2P29033 226 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
PCF11-204ENST00000530660 CARD10Q9BWT7 1032 aa16.62■□□□□ 0.25
PCF11-204ENST00000530660 CHMLP26374 656 aa16.61■□□□□ 0.25
PCF11-204ENST00000530660 E4F1Q66K89 784 aaPredicted RBP16.61■□□□□ 0.25
PCF11-204ENST00000530660 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
PCF11-204ENST00000530660 NEMFO60524 1076 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 A0A087WWV3 80 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 API5Q9BZZ5 524 aaKnown RBP16.6■□□□□ 0.25
PCF11-204ENST00000530660 ELP1O95163 1332 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 CDC25BP30305 580 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 PPP1R13BQ96KQ4 1090 aa16.6■□□□□ 0.25
PCF11-204ENST00000530660 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 H3BQF6 201 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
PCF11-204ENST00000530660 BCCIPQ9P287 314 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCF11-204ENST00000530660 STK26Q9P289 416 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 EXOC4Q96A65 974 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 PDRG1Q9NUG6 133 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 TFIP11Q9UBB9 837 aaKnown RBP16.59■□□□□ 0.25
PCF11-204ENST00000530660 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
PCF11-204ENST00000530660 KIF2AO00139 706 aaPredicted RBP16.58■□□□□ 0.25
PCF11-204ENST00000530660 GNAI1P63096 354 aa16.58■□□□□ 0.25
PCF11-204ENST00000530660 NFE2L2Q16236 605 aa16.58■□□□□ 0.25
PCF11-204ENST00000530660 CC2D1AQ6P1N0 951 aaPredicted RBP16.58■□□□□ 0.25
PCF11-204ENST00000530660 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.25
PCF11-204ENST00000530660 MEIS3Q99687 375 aa16.58■□□□□ 0.25
PCF11-204ENST00000530660 ARHGEF40Q8TER5 1519 aa16.58■□□□□ 0.25
PCF11-204ENST00000530660 ATP7AQ04656 1500 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 NR1I2O75469 434 aa16.58■□□□□ 0.24
PCF11-204ENST00000530660 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms