RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 USP21Q9UK80 565 aa7.05□□□□□ -1.28
C11orf54-208ENST00000530279 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
C11orf54-208ENST00000530279 GJA3Q9Y6H8 435 aa7.05□□□□□ -1.28
C11orf54-208ENST00000530279 USP17L8P0C7I0 530 aa7.04□□□□□ -1.28
C11orf54-208ENST00000530279 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
C11orf54-208ENST00000530279 ZNF592Q92610 1267 aa7.04□□□□□ -1.28
C11orf54-208ENST00000530279 OAS3Q9Y6K5 1087 aaKnown RBP7.04□□□□□ -1.28
C11orf54-208ENST00000530279 MROH2BQ7Z745 1585 aa7.03□□□□□ -1.28
C11orf54-208ENST00000530279 RAC1P63000 192 aa7.03□□□□□ -1.28
C11orf54-208ENST00000530279 PDE4DQ08499 809 aa7.03□□□□□ -1.28
C11orf54-208ENST00000530279 SLC51AQ86UW1 340 aa7.03□□□□□ -1.28
C11orf54-208ENST00000530279 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
C11orf54-208ENST00000530279 BAZ1BQ9UIG0 1483 aaKnown RBP7.03□□□□□ -1.28
C11orf54-208ENST00000530279 EFSO43281 561 aa7.02□□□□□ -1.29
C11orf54-208ENST00000530279 CD97P48960 835 aa7.02□□□□□ -1.29
C11orf54-208ENST00000530279 GP2P55259 537 aaKnown RBP7.02□□□□□ -1.29
C11orf54-208ENST00000530279 SAMD5Q5TGI4 173 aa7.02□□□□□ -1.29
C11orf54-208ENST00000530279 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
C11orf54-208ENST00000530279 NIFKQ9BYG3 293 aaKnown RBP7.02□□□□□ -1.29
C11orf54-208ENST00000530279 LILRB5O75023 590 aa7.01□□□□□ -1.29
C11orf54-208ENST00000530279 SKIV2LQ15477 1246 aaKnown RBP7.01□□□□□ -1.29
C11orf54-208ENST00000530279 ZIC5Q96T25 663 aa7.01□□□□□ -1.29
C11orf54-208ENST00000530279 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
C11orf54-208ENST00000530279 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
C11orf54-208ENST00000530279 TATP17735 454 aaPredicted RBP7□□□□□ -1.29
C11orf54-208ENST00000530279 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
C11orf54-208ENST00000530279 PROCA1Q8NCQ7 364 aaPredicted RBP7□□□□□ -1.29
C11orf54-208ENST00000530279 TRIM34Q9BYJ4 488 aa7□□□□□ -1.29
C11orf54-208ENST00000530279 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
C11orf54-208ENST00000530279 ETNK1Q9HBU6 452 aa7□□□□□ -1.29
C11orf54-208ENST00000530279 ADH7P40394 386 aa6.99□□□□□ -1.29
C11orf54-208ENST00000530279 CDCA7Q9BWT1 371 aaPredicted RBP6.99□□□□□ -1.29
C11orf54-208ENST00000530279 PRR23CQ6ZRP0 262 aa6.98□□□□□ -1.29
C11orf54-208ENST00000530279 WFDC12Q8WWY7 111 aa6.98□□□□□ -1.29
C11orf54-208ENST00000530279 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
C11orf54-208ENST00000530279 ZDHHC3Q9NYG2 299 aa6.97□□□□□ -1.29
C11orf54-208ENST00000530279 ZNF330Q9Y3S2 320 aaPredicted RBP6.97□□□□□ -1.29
C11orf54-208ENST00000530279 GTF3C3Q9Y5Q9 886 aa6.97□□□□□ -1.29
C11orf54-208ENST00000530279 FSTP19883 344 aa6.96□□□□□ -1.3
C11orf54-208ENST00000530279 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
C11orf54-208ENST00000530279 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.3
C11orf54-208ENST00000530279 NR1H3Q13133 447 aa6.95□□□□□ -1.3
C11orf54-208ENST00000530279 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
C11orf54-208ENST00000530279 MED26O95402 600 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 NEUROD1Q13562 356 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 BICDL1Q6ZP65 573 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
C11orf54-208ENST00000530279 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
C11orf54-208ENST00000530279 KIAA1324LA8MWY0 1029 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-208ENST00000530279 NOS3P29474 1203 aa6.93□□□□□ -1.3
C11orf54-208ENST00000530279 SH3D19Q5HYK7 790 aa6.93□□□□□ -1.3
C11orf54-208ENST00000530279 TOP2AP11388 1531 aaKnown RBP6.92□□□□□ -1.3
C11orf54-208ENST00000530279 LAMC3Q9Y6N6 1575 aa6.92□□□□□ -1.3
C11orf54-208ENST00000530279 USP4Q13107 963 aa6.92□□□□□ -1.3
C11orf54-208ENST00000530279 MEGF10Q96KG7 1140 aa6.92□□□□□ -1.3
C11orf54-208ENST00000530279 PDS5BQ9NTI5 1447 aa6.92□□□□□ -1.3
C11orf54-208ENST00000530279 SMTNP53814 917 aa6.91□□□□□ -1.3
C11orf54-208ENST00000530279 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
C11orf54-208ENST00000530279 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
C11orf54-208ENST00000530279 JPH1Q9HDC5 661 aaPredicted RBP6.91□□□□□ -1.3
C11orf54-208ENST00000530279 WIZO95785 1651 aa6.9□□□□□ -1.3
C11orf54-208ENST00000530279 INHAP05111 366 aa6.9□□□□□ -1.3
C11orf54-208ENST00000530279 ZNF295-AS1Q8N0V1 137 aa6.9□□□□□ -1.3
C11orf54-208ENST00000530279 SPEM2Q0P670 501 aa6.89□□□□□ -1.31
C11orf54-208ENST00000530279 CEP126Q9P2H0 1117 aa6.89□□□□□ -1.31
C11orf54-208ENST00000530279 CUX2O14529 1486 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 CFTRP13569 1480 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 ERCC6Q03468 1493 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 GDF10P55107 478 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 NUDT8Q8WV74 236 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 CABP1Q9NZU7 370 aa6.88□□□□□ -1.31
C11orf54-208ENST00000530279 PTCD1O75127 700 aaKnown RBP6.87□□□□□ -1.31
C11orf54-208ENST00000530279 RFC5P40937 340 aa6.87□□□□□ -1.31
C11orf54-208ENST00000530279 SCNN1DP51172 638 aa6.87□□□□□ -1.31
C11orf54-208ENST00000530279 AFF1P51825 1210 aaKnown RBP6.87□□□□□ -1.31
C11orf54-208ENST00000530279 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
C11orf54-208ENST00000530279 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
C11orf54-208ENST00000530279 LRRC69Q6ZNQ3 347 aa6.87□□□□□ -1.31
C11orf54-208ENST00000530279 RAB44Q7Z6P3 723 aaPredicted RBP6.87□□□□□ -1.31
C11orf54-208ENST00000530279 CDK2AP1O14519 115 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 ADAMTS4O75173 837 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 C8AP07357 584 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
C11orf54-208ENST00000530279 GSC2O15499 205 aa6.85□□□□□ -1.31
C11orf54-208ENST00000530279 TGFB1P01137 390 aa6.85□□□□□ -1.31
C11orf54-208ENST00000530279 IGF2-ASQ6U949 168 aa6.85□□□□□ -1.31
C11orf54-208ENST00000530279 DZIP1LQ8IYY4 767 aaKnown RBP6.85□□□□□ -1.31
C11orf54-208ENST00000530279 SIRT1Q96EB6 747 aa6.85□□□□□ -1.31
C11orf54-208ENST00000530279 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-208ENST00000530279 IQSEC3Q9UPP2 1182 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-208ENST00000530279 NESP48681 1621 aa6.85□□□□□ -1.31
C11orf54-208ENST00000530279 BRPF1P55201 1214 aaPredicted RBP6.84□□□□□ -1.31
C11orf54-208ENST00000530279 TBC1D8BQ0IIM8 1120 aa6.84□□□□□ -1.31
C11orf54-208ENST00000530279 TSGA10IPQ3SY00 556 aa6.84□□□□□ -1.31
C11orf54-208ENST00000530279 SLC24A3Q9HC58 644 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms