RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 ATAD2Q6PL18 1390 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 IQSEC2Q5JU85 1478 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 ZCCHC11Q5TAX3 1644 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 RNF17Q9BXT8 1623 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 H0YHG0 523 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 C21orf2O43822 256 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 MNAT1P51948 309 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 SARNPP82979 210 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 TCP11L2Q8N4U5 519 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 ITFG2Q969R8 447 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 RUNDC1Q96C34 613 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 TACO1Q9BSH4 297 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.88□□□□□ -1.152e-7■■■□□ 18.9
RDX-203ENST00000527537 UGGT1Q9NYU2 1555 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 NEK4P51957 841 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 UBXN4Q92575 508 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 CCDC34Q96HJ3 373 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 FAXDC2Q96IV6 333 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 SRCIN1Q9C0H9 1055 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 TRMT1Q9NXH9 659 aaKnown RBP7.88□□□□□ -1.15
RDX-203ENST00000527537 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
RDX-203ENST00000527537 SKILP12757 684 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 LIG1P18858 919 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 CCDC27Q2M243 656 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 NOB1Q9ULX3 412 aaKnown RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 A0A087WUV0 522 aaPredicted RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 ANKRD65E5RJM6 399 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 TTLL5Q6EMB2 1281 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 CWC27Q6UX04 472 aaKnown RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 SSH1Q8WYL5 1049 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 MIEF2Q96C03 454 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 ZBTB12Q9Y330 459 aaPredicted RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 MRVI1Q9Y6F6 885 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 IQGAP1P46940 1657 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 CDC25BP30305 580 aa7.87□□□□□ -1.15
RDX-203ENST00000527537 CC2D1AQ6P1N0 951 aaPredicted RBP7.87□□□□□ -1.15
RDX-203ENST00000527537 TRPM2O94759 1503 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
RDX-203ENST00000527537 SRRTQ9BXP5 876 aaKnown RBP7.86□□□□□ -1.15
RDX-203ENST00000527537 SGSM2O43147 1006 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 USP8P40818 1118 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 TYRO3Q06418 890 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 ARID5BQ14865 1188 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 TTC22Q5TAA0 569 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 MICALL1Q8N3F8 863 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 OTUD6BQ8N6M0 293 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 STAG1Q8WVM7 1258 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 CBX8Q9HC52 389 aa7.86□□□□□ -1.15
RDX-203ENST00000527537 POLR3AO14802 1390 aaPredicted RBP7.86□□□□□ -1.15
RDX-203ENST00000527537 ANKRD33BA6NCL7 494 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 H3BQF6 201 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 HNRNPH1P31943 449 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 PLEKHO1Q53GL0 409 aaPredicted RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 CCDC158Q5M9N0 1113 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 TMEM132EQ6IEE7 984 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 KAT2BQ92831 832 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 SPHKAPQ2M3C7 1700 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 ZFYVE16Q7Z3T8 1539 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 CCZ1BP86790 482 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 CCZ1P86791 482 aaPredicted RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 SNW1Q13573 536 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 ZC3H12AQ5D1E8 599 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 NAIF1Q69YI7 327 aaPredicted RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 TTC19Q6DKK2 380 aaPredicted RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 MORC1Q86VD1 984 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 TDRD7Q8NHU6 1098 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 NOS1P29475 1434 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 IRX1P78414 480 aaPredicted RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 GGT6Q6P531 493 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 CASC1Q6TDU7 716 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 FUT8Q9BYC5 575 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 SLC12A5Q9H2X9 1139 aa7.85□□□□□ -1.15
RDX-203ENST00000527537 A1CFQ9NQ94 594 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 GNL3LQ9NVN8 582 aaKnown RBP7.85□□□□□ -1.15
RDX-203ENST00000527537 FIBPO43427 364 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 ERCC3P19447 782 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 KCNV1Q6PIU1 500 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 GIMAP7Q8NHV1 300 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 FANCAO15360 1455 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 PTPRTO14522 1441 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 TADA3O75528 432 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 NEBLO76041 1014 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 EIF5P55010 431 aaKnown RBP7.84□□□□□ -1.15
RDX-203ENST00000527537 SAFB2Q14151 953 aaKnown RBP eCLIP7.84□□□□□ -1.15
RDX-203ENST00000527537 MAP3K11Q16584 847 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 ANO6Q4KMQ2 910 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 ERC1Q8IUD2 1116 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 ARFGAP3Q9NP61 516 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 VPS18Q9P253 973 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 RTL1A6NKG5 1358 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 CEP152O94986 1710 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 SHPRHQ149N8 1683 aa7.84□□□□□ -1.15
RDX-203ENST00000527537 CCDC69A6NI79 296 aa7.84□□□□□ -1.16
RDX-203ENST00000527537 EFCAB8A8MWE9 144 aa7.84□□□□□ -1.16
RDX-203ENST00000527537 IPO8O15397 1037 aaKnown RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms