RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NAA15Q9BXJ9 866 aaKnown RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 LUC7L2Q9Y383 392 aaKnown RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 PLA2R1Q13018 1463 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 MPHOSPH10O00566 681 aaKnown RBP8.41□□□□□ -1.06
CTNND1-216ENST00000527467 CABP4P57796 275 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 PLCD3Q8N3E9 789 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
CTNND1-216ENST00000527467 TRPM2O94759 1503 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 NAA25Q14CX7 972 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 CLEC11AQ9Y240 323 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 SFPQP23246 707 aaKnown RBP eCLIP8.4□□□□□ -1.061e-8■■■□□ 15.1
CTNND1-216ENST00000527467 TPD52P55327 224 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-216ENST00000527467 MXRA7P84157 204 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 SMC6Q96SB8 1091 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
CTNND1-216ENST00000527467 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 GOLIM4O00461 696 aa8.4□□□□□ -1.06
CTNND1-216ENST00000527467 SAMD1Q6SPF0 538 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-216ENST00000527467 API5Q9BZZ5 524 aaKnown RBP8.4□□□□□ -1.06
CTNND1-216ENST00000527467 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
CTNND1-216ENST00000527467 IQSEC2Q5JU85 1478 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 ATP2C2O75185 946 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 KIF4AO95239 1232 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 HYPKQ9NX55 129 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 STIM2Q9P246 746 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 COMMD10Q9Y6G5 202 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 EFCAB6Q5THR3 1501 aa8.4□□□□□ -1.07
CTNND1-216ENST00000527467 STMN1P16949 149 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 KIF6Q6ZMV9 814 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 PZPP20742 1482 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 DNAJC21Q5F1R6 531 aaKnown RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 PPFIBP2Q8ND30 876 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 SEPT8Q92599 483 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 TSNARE1Q96NA8 513 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 RSPH14Q9UHP6 348 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 HMGB1P1B2RPK0 211 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 KRT85P78386 507 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 ZBTB17Q13105 803 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 PPP1R14CQ8TAE6 165 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 BMP2KQ9NSY1 1161 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 TTC37Q6PGP7 1564 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 RFC4P35249 363 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 KRT222Q8N1A0 295 aa8.39□□□□□ -1.07
CTNND1-216ENST00000527467 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
CTNND1-216ENST00000527467 CASQ2O14958 399 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 STARD3NLO95772 234 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 LIG1P18858 919 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 ME1P48163 572 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 HLTFQ14527 1009 aaKnown RBP eCLIP8.38□□□□□ -1.075e-6■□□□□ 9.8
CTNND1-216ENST00000527467 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 MAATS1Q7Z4T9 603 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 ZHX3Q9H4I2 956 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 RAB3GAP2Q9H2M9 1393 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 MAP4K4O95819 1239 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 ZNF853P0CG23 659 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 TRIM21P19474 475 aaKnown RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 IKQ13123 557 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 BCL2L13Q9BXK5 485 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 CAMSAP1Q5T5Y3 1602 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 AAMPQ13685 434 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 FAM114A2Q9NRY5 505 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 NCOA3Q9Y6Q9 1424 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 PLIN1O60240 522 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 USO1O60763 962 aaKnown RBP8.38□□□□□ -1.07
CTNND1-216ENST00000527467 VPS36Q86VN1 386 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC110Q8TBZ0 833 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 DDX12PQ92771 950 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 PPP1R9BQ96SB3 815 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 RAI14Q9P0K7 980 aa8.38□□□□□ -1.07
CTNND1-216ENST00000527467 CFAP100Q494V2 611 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 CCDC121Q6ZUS5 278 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 TEX13AQ9BXU3 409 aaPredicted RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 THRAP3Q9Y2W1 955 aaKnown RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 KDM5CP41229 1560 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 TTC36A6NLP5 189 aa8.37□□□□□ -1.07
CTNND1-216ENST00000527467 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
CTNND1-216ENST00000527467 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms