RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
HMGB1P40-201ENST00000525121 SCN7AQ01118 1682 aa6.95□□□□□ -1.3
HMGB1P40-201ENST00000525121 MAP3K15Q6ZN16 1313 aa6.95□□□□□ -1.3
HMGB1P40-201ENST00000525121 COL24A1Q17RW2 1714 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 POLRMTO00411 1230 aaKnown RBP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 SERPINB2P05120 415 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 TM4SF1P30408 202 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 TGFB2P61812 414 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 DDR1Q08345 913 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 AIMP1Q12904 312 aaKnown RBP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 GPR162Q16538 588 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 TBC1D9BQ66K14 1250 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 NBPF5PQ86XG9 351 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 CNBD1Q8NA66 436 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 XAGE3Q8WTP9 111 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 NYXQ9GZU5 481 aa6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 NIP7Q9Y221 180 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 MYH14Q7Z406 1995 aaKnown RBP6.94□□□□□ -1.3
HMGB1P40-201ENST00000525121 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 ANXA1P04083 346 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 HNRNPUQ00839 825 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 PARP10Q53GL7 1025 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 TPTE2Q6XPS3 522 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 TTLL7Q6ZT98 887 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 COPS6Q7L5N1 327 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 C8orf58Q8NAV2 365 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 BCL2L12Q9HB09 334 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 PDZRN3Q9UPQ7 1066 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
HMGB1P40-201ENST00000525121 GPTP24298 496 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 PDE6BP35913 854 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 PDIA6Q15084 440 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 PROSER3Q2NL68 480 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 GIGYF2Q6Y7W6 1299 aaKnown RBP6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 PPP1R42Q7Z4L9 355 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 RIC3Q7Z5B4 369 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 NLGN2Q8NFZ4 835 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 PLBD2Q8NHP8 589 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 ZNF521Q96K83 1311 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 BCORQ6W2J9 1755 aa6.92□□□□□ -1.3
HMGB1P40-201ENST00000525121 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 H0YIN7 160 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 GRIN3BO60391 1043 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 NEXNQ0ZGT2 675 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 HLFQ16534 295 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 PRR5LQ6MZQ0 368 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 ANKRD13DQ6ZTN6 518 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 C2CD5Q86YS7 1000 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 TSPYL6Q8N831 410 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 BRIP1Q9BX63 1249 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 PIM2Q9P1W9 311 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 RNF123Q5XPI4 1314 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 IBTKQ9P2D0 1353 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 PXDNLA1KZ92 1463 aa6.91□□□□□ -1.3
HMGB1P40-201ENST00000525121 A0A0G2JLW4 131 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 SLC4A2P04920 1241 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 HSP90B1P14625 803 aaKnown RBP6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 DPEP1P16444 411 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 SLFN5Q08AF3 891 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 FKBP5Q13451 457 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 DALRD3Q5D0E6 543 aaKnown RBP6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 ZNF428Q96B54 188 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 UTP14AQ9BVJ6 771 aaKnown RBP6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 BCS1LQ9Y276 419 aa6.9□□□□□ -1.3
HMGB1P40-201ENST00000525121 VAMP4O75379 141 aa6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 FLIIQ13045 1269 aa6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 TCIRG1Q13488 830 aa6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 ZNF34Q8IZ26 560 aa6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 RPGRQ92834 1020 aaKnown RBP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 PHAXQ9H814 394 aaKnown RBP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 SPINK5Q9NQ38 1064 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 TRMT112Q9UI30 125 aaKnown RBP6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
HMGB1P40-201ENST00000525121 NRXN2Q9P2S2 1712 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 ZBED9Q6R2W3 1325 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 UBN2Q6ZU65 1347 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 SH3TC1Q8TE82 1336 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 NTSR2O95665 410 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 NPR1P16066 1061 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 CHRNA5P30532 468 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 SUSD4Q5VX71 490 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 STYK1Q6J9G0 422 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 KSR2Q6VAB6 950 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 NUTM1Q86Y26 1132 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 CCDC24Q8N4L8 307 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 TTLL6Q8N841 843 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 CNKSR1Q969H4 720 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 MASTLQ96GX5 879 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 MYD88Q99836 296 aa6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 METTL22Q9BUU2 404 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P40-201ENST00000525121 MAP3K2Q9Y2U5 619 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms