RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 PARP3Q9Y6F1 533 aa9.56□□□□□ -0.88
NPM1-212ENST00000524204 TXNRD3Q86VQ6 643 aa9.55□□□□□ -0.88
NPM1-212ENST00000524204 KRTAP4-7Q9BYR0 210 aa9.55□□□□□ -0.88
NPM1-212ENST00000524204 TXLNAP40222 546 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
NPM1-212ENST00000524204 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 TP53INP1Q96A56 240 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
NPM1-212ENST00000524204 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
NPM1-212ENST00000524204 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
NPM1-212ENST00000524204 MTFR1Q15390 333 aa9.53□□□□□ -0.88
NPM1-212ENST00000524204 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
NPM1-212ENST00000524204 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
NPM1-212ENST00000524204 ADH7P40394 386 aa9.52□□□□□ -0.89
NPM1-212ENST00000524204 SLC4A9Q96Q91 983 aa9.52□□□□□ -0.89
NPM1-212ENST00000524204 CABP1Q9NZU7 370 aa9.52□□□□□ -0.89
NPM1-212ENST00000524204 A0A0A0MRY4 1105 aa9.51□□□□□ -0.89
NPM1-212ENST00000524204 A6NJY4 79 aa9.51□□□□□ -0.89
NPM1-212ENST00000524204 NRG1Q02297 640 aaPredicted RBP9.51□□□□□ -0.89
NPM1-212ENST00000524204 LCE1DQ5T752 114 aa9.51□□□□□ -0.89
NPM1-212ENST00000524204 LRRC69Q6ZNQ3 347 aa9.51□□□□□ -0.89
NPM1-212ENST00000524204 RAB44Q7Z6P3 723 aaPredicted RBP9.51□□□□□ -0.89
NPM1-212ENST00000524204 LENG1Q96BZ8 264 aaPredicted RBP9.51□□□□□ -0.89
NPM1-212ENST00000524204 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
NPM1-212ENST00000524204 ELNP15502 786 aa9.49□□□□□ -0.89
NPM1-212ENST00000524204 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
NPM1-212ENST00000524204 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
NPM1-212ENST00000524204 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
NPM1-212ENST00000524204 COL17A1Q9UMD9 1497 aaPredicted RBP9.48□□□□□ -0.89
NPM1-212ENST00000524204 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
NPM1-212ENST00000524204 RNF112Q9ULX5 631 aa9.48□□□□□ -0.89
NPM1-212ENST00000524204 SOCS7O14512 581 aa9.46□□□□□ -0.9
NPM1-212ENST00000524204 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
NPM1-212ENST00000524204 LILRB5O75023 590 aa9.45□□□□□ -0.9
NPM1-212ENST00000524204 BANK1Q8NDB2 785 aa9.45□□□□□ -0.9
NPM1-212ENST00000524204 COBLO75128 1261 aa9.44□□□□□ -0.9
NPM1-212ENST00000524204 FMNL2Q96PY5 1086 aa9.44□□□□□ -0.9
NPM1-212ENST00000524204 EML1O00423 815 aa9.43□□□□□ -0.9
NPM1-212ENST00000524204 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
NPM1-212ENST00000524204 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
NPM1-212ENST00000524204 USP21Q9UK80 565 aa9.42□□□□□ -0.9
NPM1-212ENST00000524204 PAX4O43316 350 aa9.41□□□□□ -0.9
NPM1-212ENST00000524204 EIF4G2P78344 907 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPM1-212ENST00000524204 ARXQ96QS3 562 aa9.41□□□□□ -0.9
NPM1-212ENST00000524204 TXKP42681 527 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 RAC1P63000 192 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 IRF5Q13568 498 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 SH3PXD2AQ5TCZ1 1133 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
NPM1-212ENST00000524204 NUDT8Q8WV74 236 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
NPM1-212ENST00000524204 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
NPM1-212ENST00000524204 NOS2P35228 1153 aa9.39□□□□□ -0.91
NPM1-212ENST00000524204 PLPP7Q8NBV4 271 aa9.39□□□□□ -0.91
NPM1-212ENST00000524204 JPH1Q9HDC5 661 aaPredicted RBP9.39□□□□□ -0.91
NPM1-212ENST00000524204 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
NPM1-212ENST00000524204 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPM1-212ENST00000524204 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
NPM1-212ENST00000524204 TEAD4Q15561 434 aa9.38□□□□□ -0.91
NPM1-212ENST00000524204 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
NPM1-212ENST00000524204 DMRTC2Q8IXT2 367 aaPredicted RBP9.38□□□□□ -0.91
NPM1-212ENST00000524204 WFDC12Q8WWY7 111 aa9.38□□□□□ -0.91
NPM1-212ENST00000524204 PCMTD2Q9NV79 361 aa9.38□□□□□ -0.91
NPM1-212ENST00000524204 IREB2P48200 963 aaKnown RBP9.37□□□□□ -0.91
NPM1-212ENST00000524204 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
NPM1-212ENST00000524204 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
NPM1-212ENST00000524204 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
NPM1-212ENST00000524204 ARID1BQ8NFD5 2236 aaPredicted RBP9.37□□□□□ -0.91
NPM1-212ENST00000524204 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
NPM1-212ENST00000524204 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
NPM1-212ENST00000524204 BRD7Q9NPI1 651 aa9.36□□□□□ -0.91
NPM1-212ENST00000524204 NOS3P29474 1203 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 SSTR4P31391 388 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 BHMTQ93088 406 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 SLC6A14Q9UN76 642 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
NPM1-212ENST00000524204 EPHA4P54764 986 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 KCNQ4P56696 695 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
NPM1-212ENST00000524204 HSH2DQ96JZ2 352 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 UBE2OQ9C0C9 1292 aaKnown RBP9.34□□□□□ -0.91
NPM1-212ENST00000524204 IGFLR1Q9H665 355 aa9.34□□□□□ -0.91
NPM1-212ENST00000524204 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
NPM1-212ENST00000524204 NAGPAQ9UK23 515 aa9.33□□□□□ -0.92
NPM1-212ENST00000524204 ZNF232Q9UNY5 417 aa9.33□□□□□ -0.92
NPM1-212ENST00000524204 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
NPM1-212ENST00000524204 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
NPM1-212ENST00000524204 PSAPL1Q6NUJ1 521 aa9.32□□□□□ -0.92
NPM1-212ENST00000524204 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
NPM1-212ENST00000524204 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
NPM1-212ENST00000524204 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
NPM1-212ENST00000524204 GPC6Q9Y625 555 aaPredicted RBP9.32□□□□□ -0.92
NPM1-212ENST00000524204 APBB1O00213 710 aa9.31□□□□□ -0.92
NPM1-212ENST00000524204 BACH1O14867 736 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms