RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	SHANK3	Q9BYB0	1731 aa		11.27	□□□□□ -0.61
PTK2-253	ENST00000523805	GFRA3	O60609	400 aa		11.27	□□□□□ -0.61
PTK2-253	ENST00000523805	FBLN1	P23142	703 aa		11.27	□□□□□ -0.61
PTK2-253	ENST00000523805	GGCX	P38435	758 aa		11.27	□□□□□ -0.61
PTK2-253	ENST00000523805	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.27	□□□□□ -0.61
PTK2-253	ENST00000523805	NRG2	O14511	850 aa	Predicted RBP	11.26	□□□□□ -0.61
PTK2-253	ENST00000523805	KCNQ2	O43526	872 aa		11.26	□□□□□ -0.61
PTK2-253	ENST00000523805	ACTN4	O43707	911 aa	Known RBP	11.26	□□□□□ -0.61
PTK2-253	ENST00000523805	USP47	Q96K76	1375 aa		11.26	□□□□□ -0.61
PTK2-253	ENST00000523805	SRCAP	Q6ZRS2	3230 aa		11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	TESPA1	A2RU30	521 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	C11orf95	C9JLR9	678 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	IL2RB	P14784	551 aa		11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	TESK2	Q96S53	571 aa		11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	TUBGCP6	Q96RT7	1819 aa		11.25	□□□□□ -0.61
PTK2-253	ENST00000523805	ZBTB7A	O95365	584 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	CFH	P08603	1231 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	PLCB2	Q00722	1185 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	PXYLP1	Q8TE99	480 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	COG3	Q96JB2	828 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	SPON1	Q9HCB6	807 aa		11.24	□□□□□ -0.61
PTK2-253	ENST00000523805	PLSCR1	O15162	318 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	AMPH	P49418	695 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	HIC1	Q14526	733 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	TXNRD1	Q16881	649 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	KMT5B	Q4FZB7	885 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	DDX54	Q8TDD1	881 aa	Known RBP	11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	STK32B	Q9NY57	414 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	MAP3K19	Q56UN5	1328 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	PAPPA	Q13219	1627 aa		11.23	□□□□□ -0.61
PTK2-253	ENST00000523805	TLL1	O43897	1013 aa		11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	SLC10A3	P09131	477 aa		11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	RRS1	Q15050	365 aa	Known RBP	11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	ANKRD36B	Q8N2N9	1353 aa		11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	GGNBP2	Q9H3C7	697 aa		11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	NINL	Q9Y2I6	1382 aa		11.22	□□□□□ -0.61
PTK2-253	ENST00000523805	MEGF6	O75095	1541 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	BCL9	O00512	1426 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	GPR37	O15354	613 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	OAT	P04181	439 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	TMF1	P82094	1093 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	USHBP1	Q8N6Y0	703 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	SYTL4	Q96C24	671 aa	Predicted RBP	11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	POLR3GL	Q9BT43	218 aa		11.21	□□□□□ -0.61
PTK2-253	ENST00000523805	RNF223	E7ERA6	249 aa		11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	HOXC9	P31274	260 aa		11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	METTL3	Q86U44	580 aa	Known RBP	11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	IP6K1	Q92551	441 aa		11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	MAP2	P11137	1827 aa	Known RBP	11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	LY75	O60449	1722 aa		11.2	□□□□□ -0.62
PTK2-253	ENST00000523805	RBM26	Q5T8P6	1007 aa	Known RBP	11.19	□□□□□ -0.62
PTK2-253	ENST00000523805	TRAF7	Q6Q0C0	670 aa		11.19	□□□□□ -0.62
PTK2-253	ENST00000523805	EMID1	Q96A84	441 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK2-253	ENST00000523805	KCNQ4	P56696	695 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	SLC15A2	Q16348	729 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	PUS7	Q96PZ0	661 aa	Known RBP	11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	ITGB4	P16144	1822 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	QSER1	Q2KHR3	1735 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	ANKRD26	Q9UPS8	1709 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	SMG6	Q86US8	1419 aa	Known RBP	11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	NSD3	Q9BZ95	1437 aa		11.18	□□□□□ -0.62
PTK2-253	ENST00000523805	TOGARAM1	Q9Y4F4	1720 aa		11.17	□□□□□ -0.62
PTK2-253	ENST00000523805	RTL1	A6NKG5	1358 aa		11.16	□□□□□ -0.62
PTK2-253	ENST00000523805	FYB1	O15117	783 aa		11.16	□□□□□ -0.62
PTK2-253	ENST00000523805	ZNF827	Q17R98	1081 aa		11.16	□□□□□ -0.62
PTK2-253	ENST00000523805	PDZRN3	Q9UPQ7	1066 aa		11.16	□□□□□ -0.62
PTK2-253	ENST00000523805	C5	P01031	1676 aa		11.16	□□□□□ -0.62
PTK2-253	ENST00000523805	TAF1L	Q8IZX4	1826 aa		11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	GNPAT	O15228	680 aa		11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	PPM1G	O15355	546 aa	Predicted RBP	11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	ADH1B	P00325	375 aa		11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	YY1	P25490	414 aa		11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	ANKLE1	Q8NAG6	615 aa		11.15	□□□□□ -0.62
PTK2-253	ENST00000523805	PKD1L3	Q7Z443	1732 aa		11.15	□□□□□ -0.63
PTK2-253	ENST00000523805	CHD4	Q14839	1912 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	S1PR4	O95977	384 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	FECH	P22830	423 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	HSP90AB2P	Q58FF8	381 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	NBPF6	Q5VWK0	638 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	SMYD5	Q6GMV2	418 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	TRIM67	Q6ZTA4	783 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	ZCRB1	Q8TBF4	217 aa	Known RBP	11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	NBPF4	Q96M43	638 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	LRRC4B	Q9NT99	713 aa		11.14	□□□□□ -0.63
PTK2-253	ENST00000523805	NR1I2	O75469	434 aa		11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	RAPGEF4	Q8WZA2	1011 aa		11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	EMILIN1	Q9Y6C2	1016 aa		11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	NSD2	O96028	1365 aa		11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	FLT4	P35916	1363 aa		11.13	□□□□□ -0.63
PTK2-253	ENST00000523805	SLC24A1	O60721	1099 aa		11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	TAT	P17735	454 aa	Predicted RBP	11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	SLC19A1	P41440	591 aa		11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	CDCA8	Q53HL2	280 aa		11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	CARD14	Q9BXL6	1004 aa		11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	MTFR1L	Q9H019	292 aa		11.12	□□□□□ -0.63
PTK2-253	ENST00000523805	TNNT2	P45379	298 aa	Predicted RBP	11.11	□□□□□ -0.63
PTK2-253	ENST00000523805	INSR	P06213	1382 aa		11.11	□□□□□ -0.63

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