RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 ERBB4Q15303 1308 aa8.68□□□□□ -1.02
CDH12-208ENST00000522262 MSH5O43196 834 aa8.68□□□□□ -1.02
CDH12-208ENST00000522262 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
CDH12-208ENST00000522262 RFC4P35249 363 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 TBC1D9BQ66K14 1250 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 COPS6Q7L5N1 327 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 CACNA1FO60840 1977 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 BCL2L13Q9BXK5 485 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 DBF4Q9UBU7 674 aaPredicted RBP8.67□□□□□ -1.02
CDH12-208ENST00000522262 ADCY9O60503 1353 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 CARMIL3Q8ND23 1372 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 UBN2Q6ZU65 1347 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 TM4SF1P30408 202 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 AIMP1Q12904 312 aaKnown RBP8.67□□□□□ -1.02
CDH12-208ENST00000522262 NFIXQ14938 502 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 FLAD1Q8NFF5 587 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 SSH1Q8WYL5 1049 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
CDH12-208ENST00000522262 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
CDH12-208ENST00000522262 MAP3K15Q6ZN16 1313 aa8.66□□□□□ -1.02
CDH12-208ENST00000522262 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
CDH12-208ENST00000522262 POLRMTO00411 1230 aaKnown RBP8.66□□□□□ -1.02
CDH12-208ENST00000522262 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
CDH12-208ENST00000522262 TNRC6CQ9HCJ0 1690 aaKnown RBP8.66□□□□□ -1.02
CDH12-208ENST00000522262 SLC4A2P04920 1241 aa8.65□□□□□ -1.02
CDH12-208ENST00000522262 MMP10P09238 476 aa8.65□□□□□ -1.02
CDH12-208ENST00000522262 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
CDH12-208ENST00000522262 MRPL50Q8N5N7 158 aaKnown RBP8.65□□□□□ -1.02
CDH12-208ENST00000522262 ATP10DQ9P241 1426 aa8.65□□□□□ -1.03
CDH12-208ENST00000522262 ZPR1O75312 459 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 RARSP54136 660 aaKnown RBP8.64□□□□□ -1.03
CDH12-208ENST00000522262 BICDL1Q6ZP65 573 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
CDH12-208ENST00000522262 FLIIQ13045 1269 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 CCDC24Q8N4L8 307 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 ARXQ96QS3 562 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 COL4A1P02462 1669 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 BCAR3O75815 825 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 SPON1Q9HCB6 807 aa8.64□□□□□ -1.03
CDH12-208ENST00000522262 N4BP2Q86UW6 1770 aaPredicted RBP8.63□□□□□ -1.03
CDH12-208ENST00000522262 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 A0A087WZG4 1122 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 ERVV-1B6SEH8 477 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
CDH12-208ENST00000522262 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 SYNE4Q8N205 404 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 PI4KAP2A4QPH2 592 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 F6X3S4 739 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 IGKV5-2P06315 115 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 GPTP24298 496 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 PI4KAP1Q8N8J0 262 aa8.63□□□□□ -1.03
CDH12-208ENST00000522262 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
CDH12-208ENST00000522262 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
CDH12-208ENST00000522262 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 NLGN2Q8NFZ4 835 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 PLBD2Q8NHP8 589 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
CDH12-208ENST00000522262 SUSD4Q5VX71 490 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 MAP3K2Q9Y2U5 619 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 LAMB2P55268 1798 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 PRR5LQ6MZQ0 368 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 ISCA1Q9BUE6 129 aa8.62□□□□□ -1.03
CDH12-208ENST00000522262 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
CDH12-208ENST00000522262 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
CDH12-208ENST00000522262 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDH12-208ENST00000522262 NTSR2O95665 410 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 SERPINB2P05120 415 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 SLC51AQ86UW1 340 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 STK31Q9BXU1 1019 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 CWF19L2Q2TBE0 894 aaKnown RBP8.61□□□□□ -1.03
CDH12-208ENST00000522262 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
CDH12-208ENST00000522262 DLEC1Q9Y238 1755 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 RGL2O15211 777 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 KSR2Q6VAB6 950 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 MYD88Q99836 296 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 SMC4Q9NTJ3 1288 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 NOB1Q9ULX3 412 aaKnown RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 JARID2Q92833 1246 aaPredicted RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
CDH12-208ENST00000522262 TAF1P21675 1872 aa8.6□□□□□ -1.03
CDH12-208ENST00000522262 KCNA3P22001 575 aa8.59□□□□□ -1.03
CDH12-208ENST00000522262 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
CDH12-208ENST00000522262 BEND3Q5T5X7 828 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms