RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 C1orf53Q5VUE5 145 aa4.74□□□□□ -1.65
NPM1-209ENST00000521710 LYSMD3Q7Z3D4 306 aa4.74□□□□□ -1.65
NPM1-209ENST00000521710 TMC7Q7Z402 723 aa4.74□□□□□ -1.65
NPM1-209ENST00000521710 DCTN4Q9UJW0 460 aa4.74□□□□□ -1.65
NPM1-209ENST00000521710 CHMP3Q9Y3E7 222 aa4.74□□□□□ -1.65
NPM1-209ENST00000521710 SENP3-EIF4A1A0A087X0R7 540 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 DGAT1O75907 488 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 C11orf91Q3C1V1 193 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 CRIPAKQ8N1N5 446 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 IFT43Q96FT9 208 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 ASB16Q96NS5 453 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 AAASQ9NRG9 546 aa4.73□□□□□ -1.65
NPM1-209ENST00000521710 DMGDHQ9UI17 866 aaKnown RBP4.73□□□□□ -1.65
NPM1-209ENST00000521710 AXIN1O15169 862 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 THBS1P07996 1170 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 BRD2P25440 801 aaKnown RBP4.72□□□□□ -1.65
NPM1-209ENST00000521710 MSX1P28360 303 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 GRNP28799 593 aaKnown RBP4.72□□□□□ -1.65
NPM1-209ENST00000521710 GTF2E1P29083 439 aaPredicted RBP4.72□□□□□ -1.65
NPM1-209ENST00000521710 ZAP70P43403 619 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 CTC1Q2NKJ3 1217 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 FBXO33Q7Z6M2 555 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 TREML1Q86YW5 311 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 RHPN1Q8TCX5 695 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 SUSD3Q96L08 255 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 ZIC5Q96T25 663 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 RBCK1Q9BYM8 510 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 TIMMDC1Q9NPL8 285 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.72□□□□□ -1.65
NPM1-209ENST00000521710 ZDHHC3Q9NYG2 299 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 POLIQ9UNA4 740 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 USP20Q9Y2K6 914 aa4.72□□□□□ -1.65
NPM1-209ENST00000521710 RBM47A0AV96 593 aaKnown RBP4.71□□□□□ -1.66
NPM1-209ENST00000521710 A6NHS1 94 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 OPLAHO14841 1288 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 GPR182O15218 404 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 PDGFAP04085 211 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 P4HBP07237 508 aaKnown RBP4.71□□□□□ -1.66
NPM1-209ENST00000521710 ZNF16P17020 682 aaPredicted RBP4.71□□□□□ -1.66
NPM1-209ENST00000521710 DNM1Q05193 864 aaKnown RBP4.71□□□□□ -1.66
NPM1-209ENST00000521710 SCARF1Q14162 830 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 NBPF1Q3BBV0 1214 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 RGL4Q8IZJ4 473 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 EDEM1Q92611 657 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 RUBCNLQ9H714 662 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 GPAMQ9HCL2 828 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 AMOTL2Q9Y2J4 779 aa4.71□□□□□ -1.66
NPM1-209ENST00000521710 A0A1B0GTH6 734 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 A0A1W2PNR3 127 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 TREHO43280 583 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 NDUFB5O43674 189 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 MICAL2O94851 1124 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 AAMPQ13685 434 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 WDR44Q5JSH3 913 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 LRRC69Q6ZNQ3 347 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 GJD3Q8N144 294 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 ABTB2Q8N961 1025 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 GPR152Q8TDT2 470 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 GIPC2Q8TF65 315 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 SETDB2Q96T68 719 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 FAM129BQ96TA1 746 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 BCL2L13Q9BXK5 485 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 HCN2Q9UL51 889 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 BRPF3Q9ULD4 1205 aa4.7□□□□□ -1.66
NPM1-209ENST00000521710 TGFBR3LH3BV60 316 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 TATP17735 454 aaPredicted RBP4.69□□□□□ -1.66
NPM1-209ENST00000521710 INPP5BP32019 993 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 IDH3AP50213 366 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 DSC3Q14574 896 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 TRIP4Q15650 581 aaPredicted RBP4.69□□□□□ -1.66
NPM1-209ENST00000521710 ARSJQ5FYB0 599 aaPredicted RBP4.69□□□□□ -1.66
NPM1-209ENST00000521710 ALKBH2Q6NS38 261 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 BICDL1Q6ZP65 573 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 NUDT16Q96DE0 195 aaKnown RBP4.69□□□□□ -1.66
NPM1-209ENST00000521710 GGNBP2Q9H3C7 697 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 RNF19AQ9NV58 838 aa4.69□□□□□ -1.66
NPM1-209ENST00000521710 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
NPM1-209ENST00000521710 ERCC3P19447 782 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 MZF1P28698 734 aaPredicted RBP4.68□□□□□ -1.66
NPM1-209ENST00000521710 FMR1Q06787 632 aaKnown RBP eCLIP4.68□□□□□ -1.66
NPM1-209ENST00000521710 BTLAQ7Z6A9 289 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 TMC1Q8TDI8 760 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 GAS2L1Q99501 681 aaPredicted RBP4.68□□□□□ -1.66
NPM1-209ENST00000521710 CUEDC1Q9NWM3 386 aaPredicted RBP4.68□□□□□ -1.66
NPM1-209ENST00000521710 WWC3Q9ULE0 1092 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 DYRK1BQ9Y463 629 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 KCNMB2Q9Y691 235 aa4.68□□□□□ -1.66
NPM1-209ENST00000521710 MAN1A2O60476 641 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 PTSQ03393 145 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 TYRO3Q06418 890 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 EHHADHQ08426 723 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 ORC1Q13415 861 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 UBAP2LQ14157 1087 aaKnown RBP4.67□□□□□ -1.66
NPM1-209ENST00000521710 GRIN2CQ14957 1233 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.67□□□□□ -1.666e-9■□□□□ 10.2
NPM1-209ENST00000521710 IER5Q5VY09 327 aa4.67□□□□□ -1.66
NPM1-209ENST00000521710 ZSCAN29Q8IWY8 852 aaPredicted RBP4.67□□□□□ -1.66
NPM1-209ENST00000521710 ZCCHC2Q9C0B9 1178 aaKnown RBP4.67□□□□□ -1.66
NPM1-209ENST00000521710 NIF3L1Q9GZT8 377 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms