RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GRIN3BO60391 1043 aa26.85■■□□□ 1.89
TRIM35-203ENST00000521253 ANXA1P04083 346 aa26.85■■□□□ 1.89
TRIM35-203ENST00000521253 HOXB7P09629 217 aa26.85■■□□□ 1.89
TRIM35-203ENST00000521253 HLFQ16534 295 aa26.85■■□□□ 1.89
TRIM35-203ENST00000521253 AFDNP55196 1824 aaKnown RBP26.84■■□□□ 1.89
TRIM35-203ENST00000521253 KCNA3P22001 575 aa26.84■■□□□ 1.89
TRIM35-203ENST00000521253 DUSP27Q5VZP5 1158 aa26.84■■□□□ 1.89
TRIM35-203ENST00000521253 KIF6Q6ZMV9 814 aa26.84■■□□□ 1.89
TRIM35-203ENST00000521253 ERVV-1B6SEH8 477 aa26.83■■□□□ 1.89
TRIM35-203ENST00000521253 YY1P25490 414 aa26.83■■□□□ 1.89
TRIM35-203ENST00000521253 CHRNA5P30532 468 aa26.83■■□□□ 1.89
TRIM35-203ENST00000521253 HDGFL1Q5TGJ6 251 aa26.83■■□□□ 1.89
TRIM35-203ENST00000521253 N4BP2Q86UW6 1770 aaPredicted RBP26.83■■□□□ 1.89
TRIM35-203ENST00000521253 MAP3K15Q6ZN16 1313 aa26.83■■□□□ 1.89
TRIM35-203ENST00000521253 PRR5LQ6MZQ0 368 aa26.82■■□□□ 1.88
TRIM35-203ENST00000521253 NIP7Q9Y221 180 aaKnown RBP eCLIP26.82■■□□□ 1.88
TRIM35-203ENST00000521253 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
TRIM35-203ENST00000521253 ZBTB3Q9H5J0 574 aa26.81■■□□□ 1.88
TRIM35-203ENST00000521253 CCDC24Q8N4L8 307 aa26.8■■□□□ 1.88
TRIM35-203ENST00000521253 CNBD1Q8NA66 436 aa26.8■■□□□ 1.88
TRIM35-203ENST00000521253 DDX21Q9NR30 783 aaKnown RBP eCLIP26.8■■□□□ 1.88
TRIM35-203ENST00000521253 TSR2Q969E8 191 aaKnown RBP26.79■■□□□ 1.88
TRIM35-203ENST00000521253 CHPF2Q9P2E5 772 aa26.79■■□□□ 1.88
TRIM35-203ENST00000521253 BCS1LQ9Y276 419 aa26.79■■□□□ 1.88
TRIM35-203ENST00000521253 ELL2O00472 640 aaPredicted RBP26.78■■□□□ 1.88
TRIM35-203ENST00000521253 NBPF5PQ86XG9 351 aaPredicted RBP26.78■■□□□ 1.88
TRIM35-203ENST00000521253 C8orf58Q8NAV2 365 aa26.78■■□□□ 1.88
TRIM35-203ENST00000521253 PIM2Q9P1W9 311 aa26.78■■□□□ 1.88
TRIM35-203ENST00000521253 IL16Q14005 1332 aa26.77■■□□□ 1.88
TRIM35-203ENST00000521253 NPHP1O15259 732 aa26.77■■□□□ 1.88
TRIM35-203ENST00000521253 COPS6Q7L5N1 327 aa26.77■■□□□ 1.88
TRIM35-203ENST00000521253 XAGE3Q8WTP9 111 aa26.77■■□□□ 1.88
TRIM35-203ENST00000521253 BRIP1Q9BX63 1249 aa26.77■■□□□ 1.88
TRIM35-203ENST00000521253 ATP10DQ9P241 1426 aa26.75■■□□□ 1.87
TRIM35-203ENST00000521253 ST5P78524 1137 aa26.75■■□□□ 1.87
TRIM35-203ENST00000521253 AIMP1Q12904 312 aaKnown RBP26.75■■□□□ 1.87
TRIM35-203ENST00000521253 C2CD5Q86YS7 1000 aa26.75■■□□□ 1.87
TRIM35-203ENST00000521253 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
TRIM35-203ENST00000521253 FAM177BA6PVY3 158 aa26.74■■□□□ 1.87
TRIM35-203ENST00000521253 CCER2I3L3R5 266 aa26.74■■□□□ 1.87
TRIM35-203ENST00000521253 DALRD3Q5D0E6 543 aaKnown RBP26.74■■□□□ 1.87
TRIM35-203ENST00000521253 GIGYF2Q6Y7W6 1299 aaKnown RBP26.74■■□□□ 1.87
TRIM35-203ENST00000521253 WDR63Q8IWG1 891 aa26.74■■□□□ 1.87
TRIM35-203ENST00000521253 H0YIN7 160 aa26.73■■□□□ 1.87
TRIM35-203ENST00000521253 GPTP24298 496 aa26.73■■□□□ 1.87
TRIM35-203ENST00000521253 PDE6BP35913 854 aa26.73■■□□□ 1.87
TRIM35-203ENST00000521253 TPTE2Q6XPS3 522 aa26.73■■□□□ 1.87
TRIM35-203ENST00000521253 TSPYL6Q8N831 410 aa26.73■■□□□ 1.87
TRIM35-203ENST00000521253 BRCA1P38398 1863 aaKnown RBP26.72■■□□□ 1.87
TRIM35-203ENST00000521253 UBN2Q6ZU65 1347 aa26.71■■□□□ 1.87
TRIM35-203ENST00000521253 ZNF34Q8IZ26 560 aa26.71■■□□□ 1.87
TRIM35-203ENST00000521253 HYPKQ9NX55 129 aa26.7■■□□□ 1.86
TRIM35-203ENST00000521253 PDZRN3Q9UPQ7 1066 aa26.7■■□□□ 1.86
TRIM35-203ENST00000521253 CHD4Q14839 1912 aa26.7■■□□□ 1.86
TRIM35-203ENST00000521253 ANKRD31Q8N7Z5 1873 aa26.7■■□□□ 1.86
TRIM35-203ENST00000521253 NUP98P52948 1817 aa26.69■■□□□ 1.86
TRIM35-203ENST00000521253 FANCIQ9NVI1 1328 aa26.69■■□□□ 1.86
TRIM35-203ENST00000521253 DIEXFQ68CQ4 756 aaKnown RBP26.68■■□□□ 1.86
TRIM35-203ENST00000521253 GTF2E1P29083 439 aaPredicted RBP26.67■■□□□ 1.86
TRIM35-203ENST00000521253 SUSD4Q5VX71 490 aa26.67■■□□□ 1.86
TRIM35-203ENST00000521253 TTLL6Q8N841 843 aa26.67■■□□□ 1.86
TRIM35-203ENST00000521253 NYXQ9GZU5 481 aa26.67■■□□□ 1.86
TRIM35-203ENST00000521253 SPINK5Q9NQ38 1064 aaPredicted RBP26.67■■□□□ 1.86
TRIM35-203ENST00000521253 ARHGAP27Q6ZUM4 889 aa26.66■■□□□ 1.86
TRIM35-203ENST00000521253 NUTM1Q86Y26 1132 aa26.66■■□□□ 1.86
TRIM35-203ENST00000521253 ZNF622Q969S3 477 aaKnown RBP eCLIP26.66■■□□□ 1.86
TRIM35-203ENST00000521253 IBTKQ9P2D0 1353 aaPredicted RBP26.66■■□□□ 1.86
TRIM35-203ENST00000521253 TWISTNBQ3B726 338 aaPredicted RBP26.65■■□□□ 1.86
TRIM35-203ENST00000521253 HSP90AB3PQ58FF7 597 aa26.65■■□□□ 1.86
TRIM35-203ENST00000521253 CCDC30Q5VVM6 783 aa26.65■■□□□ 1.86
TRIM35-203ENST00000521253 ANKRD13DQ6ZTN6 518 aa26.65■■□□□ 1.86
TRIM35-203ENST00000521253 PLBD2Q8NHP8 589 aa26.65■■□□□ 1.86
TRIM35-203ENST00000521253 CHMP4AQ9BY43 222 aa26.65■■□□□ 1.86
TRIM35-203ENST00000521253 DLEC1Q9Y238 1755 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 ABCC12Q96J65 1359 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 SRGNP10124 158 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 TCIRG1Q13488 830 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 ERFEQ4G0M1 354 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 PARP10Q53GL7 1025 aa26.64■■□□□ 1.86
TRIM35-203ENST00000521253 PHAXQ9H814 394 aaKnown RBP26.64■■□□□ 1.86
TRIM35-203ENST00000521253 ZNF521Q96K83 1311 aa26.64■■□□□ 1.85
TRIM35-203ENST00000521253 COL11A2P13942 1736 aaPredicted RBP26.63■■□□□ 1.85
TRIM35-203ENST00000521253 KLRG2A4D1S0 409 aaPredicted RBP26.63■■□□□ 1.85
TRIM35-203ENST00000521253 NTSR2O95665 410 aa26.63■■□□□ 1.85
TRIM35-203ENST00000521253 PPP1R42Q7Z4L9 355 aa26.62■■□□□ 1.85
TRIM35-203ENST00000521253 MASTLQ96GX5 879 aa26.62■■□□□ 1.85
TRIM35-203ENST00000521253 ARFGEF1Q9Y6D6 1849 aa26.62■■□□□ 1.85
TRIM35-203ENST00000521253 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
TRIM35-203ENST00000521253 STYK1Q6J9G0 422 aa26.61■■□□□ 1.85
TRIM35-203ENST00000521253 ZNF784Q8NCA9 323 aaPredicted RBP26.61■■□□□ 1.85
TRIM35-203ENST00000521253 TCERG1O14776 1098 aaKnown RBP26.6■■□□□ 1.85
TRIM35-203ENST00000521253 EXOSC9Q06265 439 aaKnown RBP26.6■■□□□ 1.85
TRIM35-203ENST00000521253 NLRP10Q86W26 655 aa26.6■■□□□ 1.85
TRIM35-203ENST00000521253 MIER1Q8N108 512 aa26.6■■□□□ 1.85
TRIM35-203ENST00000521253 UTP14AQ9BVJ6 771 aaKnown RBP26.6■■□□□ 1.85
TRIM35-203ENST00000521253 MYH16Q9H6N6 1097 aa26.6■■□□□ 1.85
TRIM35-203ENST00000521253 CNKSR1Q969H4 720 aa26.59■■□□□ 1.85
TRIM35-203ENST00000521253 NPR1P16066 1061 aa26.58■■□□□ 1.85
TRIM35-203ENST00000521253 STK31Q9BXU1 1019 aa26.58■■□□□ 1.85
TRIM35-203ENST00000521253 RIC3Q7Z5B4 369 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms