RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 LRRC69Q6ZNQ3 347 aa9.91□□□□□ -0.82
LINC00535-204ENST00000520513 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
LINC00535-204ENST00000520513 HCN4Q9Y3Q4 1203 aa9.91□□□□□ -0.82
LINC00535-204ENST00000520513 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
LINC00535-204ENST00000520513 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
LINC00535-204ENST00000520513 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
LINC00535-204ENST00000520513 EDARADDQ8WWZ3 215 aa9.9□□□□□ -0.82
LINC00535-204ENST00000520513 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
LINC00535-204ENST00000520513 ITGB2P05107 769 aa9.89□□□□□ -0.83
LINC00535-204ENST00000520513 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
LINC00535-204ENST00000520513 PSMA6P60900 246 aaKnown RBP9.89□□□□□ -0.83
LINC00535-204ENST00000520513 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
LINC00535-204ENST00000520513 HIRAP54198 1017 aaPredicted RBP9.88□□□□□ -0.83
LINC00535-204ENST00000520513 DPYDQ12882 1025 aa9.88□□□□□ -0.83
LINC00535-204ENST00000520513 FAM182BQ5T319 152 aa9.88□□□□□ -0.83
LINC00535-204ENST00000520513 FCHSD1Q86WN1 690 aa9.88□□□□□ -0.83
LINC00535-204ENST00000520513 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
LINC00535-204ENST00000520513 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
LINC00535-204ENST00000520513 ARAFP10398 606 aa9.87□□□□□ -0.83
LINC00535-204ENST00000520513 EPXP11678 715 aa9.87□□□□□ -0.83
LINC00535-204ENST00000520513 PHACTR1Q9C0D0 580 aa9.87□□□□□ -0.83
LINC00535-204ENST00000520513 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L10C9JJH3 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L12C9JPN9 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L21D6R901 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
LINC00535-204ENST00000520513 IGHA1P01876 353 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 SEC13P55735 322 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
LINC00535-204ENST00000520513 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
LINC00535-204ENST00000520513 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
LINC00535-204ENST00000520513 PCBP4P57723 403 aaKnown RBP9.85□□□□□ -0.83
LINC00535-204ENST00000520513 HOMEZQ8IX15 550 aa9.85□□□□□ -0.83
LINC00535-204ENST00000520513 RHPN1Q8TCX5 695 aa9.85□□□□□ -0.83
LINC00535-204ENST00000520513 C2orf49Q9BVC5 232 aaPredicted RBP9.85□□□□□ -0.83
LINC00535-204ENST00000520513 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 CDCA8Q53HL2 280 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 LINC00114Q6XXX2 140 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 DCAF5Q96JK2 942 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 BTBD6Q96KE9 485 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 AVENQ9NQS1 362 aaPredicted RBP9.84□□□□□ -0.83
LINC00535-204ENST00000520513 MARK1Q9P0L2 795 aa9.84□□□□□ -0.83
LINC00535-204ENST00000520513 GPC6Q9Y625 555 aaPredicted RBP9.84□□□□□ -0.83
LINC00535-204ENST00000520513 COL8A1P27658 744 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 C1orf53Q5VUE5 145 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 LARP1Q6PKG0 1096 aaKnown RBP9.83□□□□□ -0.84
LINC00535-204ENST00000520513 ANKMY2Q8IV38 441 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 SLC30A3Q99726 388 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 MDFIQ99750 246 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 VRTNQ9H8Y1 702 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 MKL2Q9ULH7 1088 aa9.83□□□□□ -0.84
LINC00535-204ENST00000520513 ZNF468Q5VIY5 522 aaPredicted RBP9.82□□□□□ -0.84
LINC00535-204ENST00000520513 CHMP7Q8WUX9 453 aaPredicted RBP9.82□□□□□ -0.84
LINC00535-204ENST00000520513 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
LINC00535-204ENST00000520513 SUV39H2Q9H5I1 410 aa9.82□□□□□ -0.84
LINC00535-204ENST00000520513 LAMC2Q13753 1193 aa9.81□□□□□ -0.84
LINC00535-204ENST00000520513 GPAT2Q6NUI2 795 aa9.81□□□□□ -0.84
LINC00535-204ENST00000520513 STAG2Q8N3U4 1231 aa9.81□□□□□ -0.84
LINC00535-204ENST00000520513 ADH6P28332 368 aa9.8□□□□□ -0.84
LINC00535-204ENST00000520513 DGKGP49619 791 aa9.8□□□□□ -0.84
LINC00535-204ENST00000520513 HINFPQ9BQA5 517 aa9.8□□□□□ -0.84
LINC00535-204ENST00000520513 RRAGCQ9HB90 399 aa9.8□□□□□ -0.84
LINC00535-204ENST00000520513 RFX1P22670 979 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 TYRO3Q06418 890 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 PLA2G4EQ3MJ16 856 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 ALYREFQ86V81 257 aaKnown RBP9.79□□□□□ -0.84
LINC00535-204ENST00000520513 NGLY1Q96IV0 654 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 BCS1LQ9Y276 419 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
LINC00535-204ENST00000520513 RBM19Q9Y4C8 960 aaKnown RBP9.79□□□□□ -0.84
LINC00535-204ENST00000520513 PIK3R2O00459 728 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 AMPD1P23109 780 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
LINC00535-204ENST00000520513 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 C1orf115Q9H7X2 142 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 PRR12Q9ULL5 1215 aa9.78□□□□□ -0.84
LINC00535-204ENST00000520513 KRBA1A5PL33 1030 aa9.77□□□□□ -0.85
LINC00535-204ENST00000520513 SRPK2P78362 688 aaKnown RBP9.77□□□□□ -0.85
LINC00535-204ENST00000520513 BRD7Q9NPI1 651 aa9.77□□□□□ -0.85
LINC00535-204ENST00000520513 IGFBP4P22692 258 aa9.76□□□□□ -0.85
LINC00535-204ENST00000520513 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
LINC00535-204ENST00000520513 WEE1P30291 646 aa9.76□□□□□ -0.85
LINC00535-204ENST00000520513 CEP63Q96MT8 703 aa9.76□□□□□ -0.85
LINC00535-204ENST00000520513 NEUROD4Q9HD90 331 aa9.76□□□□□ -0.85
LINC00535-204ENST00000520513 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
LINC00535-204ENST00000520513 KCNQ4P56696 695 aa9.75□□□□□ -0.85
LINC00535-204ENST00000520513 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
LINC00535-204ENST00000520513 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
LINC00535-204ENST00000520513 GNB5O14775 395 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms