RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 ADGRL3Q9HAR2 1447 aa28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 KIAA2012Q0VF49 1180 aa28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 RABEP1Q15276 862 aa28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 FOXD4L6Q3SYB3 417 aaPredicted RBP28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 FOXD4L3Q6VB84 417 aaPredicted RBP28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 CEMIPQ8WUJ3 1361 aa28.15■■■□□ 2.1
KCNQ3-202ENST00000519445 PRPF40AO75400 957 aaKnown RBP28.14■■■□□ 2.1
KCNQ3-202ENST00000519445 NEK4P51957 841 aa28.14■■■□□ 2.1
KCNQ3-202ENST00000519445 NFAT5O94916 1531 aa28.14■■■□□ 2.1
KCNQ3-202ENST00000519445 AKAP4Q5JQC9 854 aa28.14■■■□□ 2.09
KCNQ3-202ENST00000519445 MAP3K2Q9Y2U5 619 aa28.14■■■□□ 2.09
KCNQ3-202ENST00000519445 SALL3Q9BXA9 1300 aa28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 BEND3Q5T5X7 828 aa28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 LMBRD1Q9NUN5 540 aa28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 CHD2O14647 1828 aaKnown RBP28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 MYL6BP14649 208 aa28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 MCM5P33992 734 aa28.13■■■□□ 2.09
KCNQ3-202ENST00000519445 ZNF771Q7L3S4 317 aaPredicted RBP28.12■■■□□ 2.09
KCNQ3-202ENST00000519445 CDK11BP21127 795 aaKnown RBP28.12■■■□□ 2.09
KCNQ3-202ENST00000519445 U2AF2P26368 475 aaKnown RBP eCLIP28.12■■■□□ 2.09
KCNQ3-202ENST00000519445 OS9Q13438 667 aaPredicted RBP28.11■■■□□ 2.09
KCNQ3-202ENST00000519445 FAM208AQ9UK61 1670 aaKnown RBP28.11■■■□□ 2.09
KCNQ3-202ENST00000519445 ESYT1Q9BSJ8 1104 aa28.11■■■□□ 2.09
KCNQ3-202ENST00000519445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.11■■■□□ 2.09
KCNQ3-202ENST00000519445 NPHP4O75161 1426 aaPredicted RBP28.11■■■□□ 2.09
KCNQ3-202ENST00000519445 REC8O95072 547 aa28.1■■■□□ 2.09
KCNQ3-202ENST00000519445 CHMLP26374 656 aa28.1■■■□□ 2.09
KCNQ3-202ENST00000519445 TPRNQ4KMQ1 711 aa28.1■■■□□ 2.09
KCNQ3-202ENST00000519445 GPT2Q8TD30 523 aa28.1■■■□□ 2.09
KCNQ3-202ENST00000519445 ADCY9O60503 1353 aa28.09■■■□□ 2.09
KCNQ3-202ENST00000519445 RHPN1Q8TCX5 695 aa28.09■■■□□ 2.09
KCNQ3-202ENST00000519445 OSBPL3Q9H4L5 887 aa28.09■■■□□ 2.09
KCNQ3-202ENST00000519445 LRRC37A3O60309 1634 aa28.09■■■□□ 2.09
KCNQ3-202ENST00000519445 KLHDC4Q8TBB5 520 aa28.08■■■□□ 2.09
KCNQ3-202ENST00000519445 SSH3Q8TE77 659 aa28.08■■■□□ 2.09
KCNQ3-202ENST00000519445 GIGYF1O75420 1035 aaPredicted RBP28.08■■■□□ 2.09
KCNQ3-202ENST00000519445 TAF7LQ5H9L4 462 aa28.08■■■□□ 2.09
KCNQ3-202ENST00000519445 C9orf78Q9NZ63 289 aaPredicted RBP28.08■■■□□ 2.09
KCNQ3-202ENST00000519445 HSPA2P54652 639 aa28.07■■■□□ 2.08
KCNQ3-202ENST00000519445 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
KCNQ3-202ENST00000519445 BCL2L12Q9HB09 334 aa28.07■■■□□ 2.08
KCNQ3-202ENST00000519445 NSFL1CQ9UNZ2 370 aaKnown RBP28.07■■■□□ 2.08
KCNQ3-202ENST00000519445 CSB-PGBD3P0DP91 1061 aa28.07■■■□□ 2.08
KCNQ3-202ENST00000519445 PDCL2Q8N4E4 241 aa28.06■■■□□ 2.08
KCNQ3-202ENST00000519445 NFATC2IPQ8NCF5 419 aa28.06■■■□□ 2.08
KCNQ3-202ENST00000519445 SIL1Q9H173 461 aa28.06■■■□□ 2.08
KCNQ3-202ENST00000519445 TMEM63CQ9P1W3 806 aa28.06■■■□□ 2.08
KCNQ3-202ENST00000519445 KIF3AQ9Y496 699 aa28.05■■■□□ 2.08
KCNQ3-202ENST00000519445 ST18O60284 1047 aa28.04■■■□□ 2.08
KCNQ3-202ENST00000519445 SPG7Q9UQ90 795 aa28.04■■■□□ 2.08
KCNQ3-202ENST00000519445 CPA1P15085 419 aa28.03■■■□□ 2.08
KCNQ3-202ENST00000519445 CWC27Q6UX04 472 aaKnown RBP28.02■■■□□ 2.08
KCNQ3-202ENST00000519445 DBF4Q9UBU7 674 aaPredicted RBP28.02■■■□□ 2.08
KCNQ3-202ENST00000519445 LRSAM1Q6UWE0 723 aa28.02■■■□□ 2.08
KCNQ3-202ENST00000519445 TTC12Q9H892 705 aaPredicted RBP28■■■□□ 2.07
KCNQ3-202ENST00000519445 ZDHHC9Q9Y397 364 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 NOLC1Q14978 699 aaKnown RBP eCLIP28■■■□□ 2.07
KCNQ3-202ENST00000519445 CLEC17AQ6ZS10 378 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 PI4K2BQ8TCG2 481 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 TMX3Q96JJ7 454 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 PRIMPOLQ96LW4 560 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 POLA2Q14181 598 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 CHMP4AQ9BY43 222 aa28■■■□□ 2.07
KCNQ3-202ENST00000519445 ERBB3P21860 1342 aa27.99■■■□□ 2.07
KCNQ3-202ENST00000519445 AMOTQ4VCS5 1084 aa27.99■■■□□ 2.07
KCNQ3-202ENST00000519445 RAPGEF4Q8WZA2 1011 aa27.99■■■□□ 2.07
KCNQ3-202ENST00000519445 BABAM1Q9NWV8 329 aa27.98■■■□□ 2.07
KCNQ3-202ENST00000519445 CCDC9Q9Y3X0 531 aaKnown RBP27.98■■■□□ 2.07
KCNQ3-202ENST00000519445 KCNJ4P48050 445 aa27.97■■■□□ 2.07
KCNQ3-202ENST00000519445 HMGN5P82970 282 aaKnown RBP27.97■■■□□ 2.07
KCNQ3-202ENST00000519445 SUCLG2Q96I99 432 aa27.97■■■□□ 2.07
KCNQ3-202ENST00000519445 ATF3P18847 181 aa27.97■■■□□ 2.07
KCNQ3-202ENST00000519445 C19orf44Q9H6X5 657 aa27.97■■■□□ 2.07
KCNQ3-202ENST00000519445 CCDC8Q9H0W5 538 aaPredicted RBP27.96■■■□□ 2.07
KCNQ3-202ENST00000519445 STAP2Q9UGK3 403 aa27.96■■■□□ 2.07
KCNQ3-202ENST00000519445 USP16Q9Y5T5 823 aa27.96■■■□□ 2.07
KCNQ3-202ENST00000519445 RGPD5Q99666 1765 aa27.95■■■□□ 2.07
KCNQ3-202ENST00000519445 KIF1BPQ96EK5 621 aa27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 KAZALD1Q96I82 304 aa27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 ZNF496Q96IT1 587 aaPredicted RBP27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 BICC1Q9H694 974 aaKnown RBP27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 IRX5P78411 483 aaPredicted RBP27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 C1orf167Q5SNV9 1468 aa27.95■■■□□ 2.06
KCNQ3-202ENST00000519445 KSR2Q6VAB6 950 aa27.94■■■□□ 2.06
KCNQ3-202ENST00000519445 RIC3Q7Z5B4 369 aa27.94■■■□□ 2.06
KCNQ3-202ENST00000519445 TLR7Q9NYK1 1049 aaKnown RBP27.94■■■□□ 2.06
KCNQ3-202ENST00000519445 GTF2F1P35269 517 aaKnown RBP eCLIP27.94■■■□□ 2.06
KCNQ3-202ENST00000519445 NDUFB9Q9Y6M9 179 aa27.94■■■□□ 2.06
KCNQ3-202ENST00000519445 PDIA6Q15084 440 aa27.93■■■□□ 2.06
KCNQ3-202ENST00000519445 ZNF790Q6PG37 636 aa27.93■■■□□ 2.06
KCNQ3-202ENST00000519445 RASEFQ8IZ41 740 aa27.93■■■□□ 2.06
KCNQ3-202ENST00000519445 TMEM94Q12767 1356 aa27.93■■■□□ 2.06
KCNQ3-202ENST00000519445 XAGE3Q8WTP9 111 aa27.93■■■□□ 2.06
KCNQ3-202ENST00000519445 COPS6Q7L5N1 327 aa27.92■■■□□ 2.06
KCNQ3-202ENST00000519445 COL9A3Q14050 684 aaPredicted RBP27.92■■■□□ 2.06
KCNQ3-202ENST00000519445 PIBF1Q8WXW3 757 aa27.92■■■□□ 2.06
KCNQ3-202ENST00000519445 ATP5J2-PTCD1G3V325 749 aa27.91■■■□□ 2.06
KCNQ3-202ENST00000519445 PTCD1O75127 700 aaKnown RBP27.91■■■□□ 2.06
KCNQ3-202ENST00000519445 GDPD2Q9HCC8 539 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms