RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
PABPC1-207ENST00000518716 NUDT12Q9BQG2 462 aa9.06□□□□□ -0.96
PABPC1-207ENST00000518716 BTG4Q9NY30 223 aa9.06□□□□□ -0.96
PABPC1-207ENST00000518716 THSD7AQ9UPZ6 1657 aa9.06□□□□□ -0.96
PABPC1-207ENST00000518716 RGPD1P0DJD0 1748 aa9.05□□□□□ -0.96
PABPC1-207ENST00000518716 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
PABPC1-207ENST00000518716 HOXA2O43364 376 aa9.05□□□□□ -0.96
PABPC1-207ENST00000518716 CCDC9Q9Y3X0 531 aaKnown RBP9.05□□□□□ -0.96
PABPC1-207ENST00000518716 TNS1Q9HBL0 1735 aaKnown RBP9.05□□□□□ -0.96
PABPC1-207ENST00000518716 IFT172Q9UG01 1749 aa9.05□□□□□ -0.96
PABPC1-207ENST00000518716 UTRNP46939 3433 aa9.04□□□□□ -0.96
PABPC1-207ENST00000518716 TIMP2P16035 220 aa9.04□□□□□ -0.96
PABPC1-207ENST00000518716 NNTQ13423 1086 aa9.04□□□□□ -0.96
PABPC1-207ENST00000518716 TRPM3Q9HCF6 1732 aaPredicted RBP9.04□□□□□ -0.96
PABPC1-207ENST00000518716 ANKARQ7Z5J8 1434 aa9.04□□□□□ -0.96
PABPC1-207ENST00000518716 PARD3Q8TEW0 1356 aa9.03□□□□□ -0.96
PABPC1-207ENST00000518716 USP46P62068 366 aa9.03□□□□□ -0.96
PABPC1-207ENST00000518716 SCARF1Q14162 830 aa9.03□□□□□ -0.96
PABPC1-207ENST00000518716 RGL3Q3MIN7 710 aa9.03□□□□□ -0.96
PABPC1-207ENST00000518716 COL14A1Q05707 1796 aaKnown RBP9.03□□□□□ -0.96
PABPC1-207ENST00000518716 ALS2Q96Q42 1657 aa9.03□□□□□ -0.96
PABPC1-207ENST00000518716 FAM196AQ6ZSG2 479 aa9.02□□□□□ -0.97
PABPC1-207ENST00000518716 PMFBP1Q8TBY8 1022 aa9.02□□□□□ -0.97
PABPC1-207ENST00000518716 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
PABPC1-207ENST00000518716 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 YY1P25490 414 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 KRT76Q01546 638 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
PABPC1-207ENST00000518716 PRAM1Q96QH2 718 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 KLF16Q9BXK1 252 aaPredicted RBP9.01□□□□□ -0.97
PABPC1-207ENST00000518716 CRYBG1Q9Y4K1 1723 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 PRR36Q9H6K5 1346 aa9.01□□□□□ -0.97
PABPC1-207ENST00000518716 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
PABPC1-207ENST00000518716 DLC1Q96QB1 1528 aa9□□□□□ -0.97
PABPC1-207ENST00000518716 TRIM37O94972 964 aa9□□□□□ -0.97
PABPC1-207ENST00000518716 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
PABPC1-207ENST00000518716 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
PABPC1-207ENST00000518716 DHX57Q6P158 1386 aaKnown RBP8.99□□□□□ -0.97
PABPC1-207ENST00000518716 ADGRB2O60241 1585 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 APBA3O96018 575 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 ADH1CP00326 375 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 MPHOSPH9Q99550 1183 aa8.99□□□□□ -0.97
PABPC1-207ENST00000518716 RREB1Q92766 1687 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 CCNYL3P0C7X3 344 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 VSIG10Q8N0Z9 540 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 MPNDQ8N594 471 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 BAP1Q92560 729 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 ADGRB1O14514 1584 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 NINLQ9Y2I6 1382 aa8.98□□□□□ -0.97
PABPC1-207ENST00000518716 NUP188Q5SRE5 1749 aa8.97□□□□□ -0.97
PABPC1-207ENST00000518716 MAN1A2O60476 641 aa8.97□□□□□ -0.97
PABPC1-207ENST00000518716 SAFB2Q14151 953 aaKnown RBP eCLIP8.97□□□□□ -0.97
PABPC1-207ENST00000518716 UNC93B1Q9H1C4 597 aa8.97□□□□□ -0.97
PABPC1-207ENST00000518716 PRDM11Q9NQV5 511 aa8.97□□□□□ -0.97
PABPC1-207ENST00000518716 KIAA0232Q92628 1395 aa8.97□□□□□ -0.97
PABPC1-207ENST00000518716 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.98
PABPC1-207ENST00000518716 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.98
PABPC1-207ENST00000518716 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.98
PABPC1-207ENST00000518716 KCNQ2O43526 872 aa8.96□□□□□ -0.98
PABPC1-207ENST00000518716 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
PABPC1-207ENST00000518716 GPR161Q8N6U8 529 aaKnown RBP8.96□□□□□ -0.98
PABPC1-207ENST00000518716 SPON1Q9HCB6 807 aa8.96□□□□□ -0.98
PABPC1-207ENST00000518716 TULP4Q9NRJ4 1543 aa8.95□□□□□ -0.98
PABPC1-207ENST00000518716 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
PABPC1-207ENST00000518716 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
PABPC1-207ENST00000518716 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
PABPC1-207ENST00000518716 ZNF511Q8NB15 262 aa8.95□□□□□ -0.98
PABPC1-207ENST00000518716 SSH2Q76I76 1423 aa8.95□□□□□ -0.98
PABPC1-207ENST00000518716 MS4A1P11836 297 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 NBPF8Q3BBV2 869 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 C6orf118Q5T5N4 469 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 XP32Q5T750 250 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 NBPF14Q5TI25 921 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 CNTNAP3BQ96NU0 1288 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 HIRIP3Q9BW71 556 aaPredicted RBP8.94□□□□□ -0.98
PABPC1-207ENST00000518716 CNTNAP3Q9BZ76 1288 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 POGKQ9P215 609 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 CAMTA1Q9Y6Y1 1673 aa8.94□□□□□ -0.98
PABPC1-207ENST00000518716 PLSCR1O15162 318 aa8.93□□□□□ -0.98
PABPC1-207ENST00000518716 MDM2Q00987 491 aaPredicted RBP8.93□□□□□ -0.98
PABPC1-207ENST00000518716 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
PABPC1-207ENST00000518716 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
PABPC1-207ENST00000518716 NGDNQ8NEJ9 315 aaKnown RBP8.93□□□□□ -0.98
PABPC1-207ENST00000518716 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
PABPC1-207ENST00000518716 KDM2AQ9Y2K7 1162 aa8.93□□□□□ -0.98
PABPC1-207ENST00000518716 CPDO75976 1380 aa8.93□□□□□ -0.98
PABPC1-207ENST00000518716 EIF3AQ14152 1382 aaKnown RBP8.93□□□□□ -0.98
PABPC1-207ENST00000518716 PEAK1Q9H792 1746 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 LMO7Q8WWI1 1683 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 ATP7BP35670 1465 aa8.92□□□□□ -0.98
PABPC1-207ENST00000518716 POLR3AO14802 1390 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
PABPC1-207ENST00000518716 PDE3BQ13370 1112 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms