RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 VSIG10Q8N0Z9 540 aa29.07■■■□□ 2.24
SLIT3-204ENST00000518140 GRM8O00222 908 aa29.06■■■□□ 2.24
SLIT3-204ENST00000518140 OTUD7AQ8TE49 926 aaPredicted RBP29.06■■■□□ 2.24
SLIT3-204ENST00000518140 SSH3Q8TE77 659 aa29.06■■■□□ 2.24
SLIT3-204ENST00000518140 NEXNQ0ZGT2 675 aa29.05■■■□□ 2.24
SLIT3-204ENST00000518140 PLBD2Q8NHP8 589 aa29.05■■■□□ 2.24
SLIT3-204ENST00000518140 ANP32AP39687 249 aaKnown RBP29.05■■■□□ 2.24
SLIT3-204ENST00000518140 ATP5J2-PTCD1G3V325 749 aa29.04■■■□□ 2.24
SLIT3-204ENST00000518140 DOT1LQ8TEK3 1739 aa29.04■■■□□ 2.24
SLIT3-204ENST00000518140 KAZALD1Q96I82 304 aa29.04■■■□□ 2.24
SLIT3-204ENST00000518140 POLA2Q14181 598 aa29.03■■■□□ 2.24
SLIT3-204ENST00000518140 GCKRQ14397 625 aa29.03■■■□□ 2.24
SLIT3-204ENST00000518140 PLEKHM2Q8IWE5 1019 aa29.03■■■□□ 2.24
SLIT3-204ENST00000518140 UTYO14607 1347 aa29.03■■■□□ 2.24
SLIT3-204ENST00000518140 SRGAP3O43295 1099 aa29.03■■■□□ 2.24
SLIT3-204ENST00000518140 MEX3CQ5U5Q3 659 aaKnown RBP29.03■■■□□ 2.24
SLIT3-204ENST00000518140 JARID2Q92833 1246 aaPredicted RBP29.03■■■□□ 2.24
SLIT3-204ENST00000518140 TEX13AQ9BXU3 409 aaPredicted RBP29.03■■■□□ 2.24
SLIT3-204ENST00000518140 SUCLG2Q96I99 432 aa29.02■■■□□ 2.24
SLIT3-204ENST00000518140 KCNQ2O43526 872 aa29.01■■■□□ 2.24
SLIT3-204ENST00000518140 IPO9Q96P70 1041 aaKnown RBP29.01■■■□□ 2.23
SLIT3-204ENST00000518140 STARD3NLO95772 234 aa29■■■□□ 2.23
SLIT3-204ENST00000518140 ZBTB3Q9H5J0 574 aa29■■■□□ 2.23
SLIT3-204ENST00000518140 ZNF330Q9Y3S2 320 aaPredicted RBP29■■■□□ 2.23
SLIT3-204ENST00000518140 CYP19A1P11511 503 aaPredicted RBP29■■■□□ 2.23
SLIT3-204ENST00000518140 ZBTB47Q9UFB7 747 aaPredicted RBP29■■■□□ 2.23
SLIT3-204ENST00000518140 IBTKQ9P2D0 1353 aaPredicted RBP28.98■■■□□ 2.23
SLIT3-204ENST00000518140 BICC1Q9H694 974 aaKnown RBP28.97■■■□□ 2.23
SLIT3-204ENST00000518140 ARFGEF2Q9Y6D5 1785 aa28.97■■■□□ 2.23
SLIT3-204ENST00000518140 AFF2P51816 1311 aa28.97■■■□□ 2.23
SLIT3-204ENST00000518140 MTX1Q13505 466 aa28.97■■■□□ 2.23
SLIT3-204ENST00000518140 SURF6O75683 361 aaKnown RBP28.96■■■□□ 2.23
SLIT3-204ENST00000518140 EPHA10Q5JZY3 1008 aa28.95■■■□□ 2.23
SLIT3-204ENST00000518140 LRRCC1Q9C099 1032 aa28.95■■■□□ 2.23
SLIT3-204ENST00000518140 BMP2KLQ5H9B9 411 aa28.95■■■□□ 2.22
SLIT3-204ENST00000518140 GSPT1P15170 499 aaKnown RBP28.93■■■□□ 2.22
SLIT3-204ENST00000518140 PTF1AQ7RTS3 328 aa28.93■■■□□ 2.22
SLIT3-204ENST00000518140 ZBTB1Q9Y2K1 713 aa28.93■■■□□ 2.22
SLIT3-204ENST00000518140 A0A087WZG4 1122 aa28.92■■■□□ 2.22
SLIT3-204ENST00000518140 FAM182BQ5T319 152 aa28.92■■■□□ 2.22
SLIT3-204ENST00000518140 UBE3BQ7Z3V4 1068 aa28.92■■■□□ 2.22
SLIT3-204ENST00000518140 GJD4Q96KN9 370 aaPredicted RBP28.92■■■□□ 2.22
SLIT3-204ENST00000518140 HDAC5Q9UQL6 1122 aa28.92■■■□□ 2.22
SLIT3-204ENST00000518140 ARXQ96QS3 562 aa28.91■■■□□ 2.22
SLIT3-204ENST00000518140 PA2G4Q9UQ80 394 aaKnown RBP28.91■■■□□ 2.22
SLIT3-204ENST00000518140 IL1RAPL2Q9NP60 686 aa28.9■■■□□ 2.22
SLIT3-204ENST00000518140 CASP7P55210 303 aa28.9■■■□□ 2.22
SLIT3-204ENST00000518140 LOC102724428A0A0B4J2F2 783 aa28.89■■■□□ 2.22
SLIT3-204ENST00000518140 ATP6V1AP38606 617 aa28.89■■■□□ 2.22
SLIT3-204ENST00000518140 SIK1P57059 783 aa28.89■■■□□ 2.22
SLIT3-204ENST00000518140 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
SLIT3-204ENST00000518140 ITPK1Q13572 414 aa28.89■■■□□ 2.21
SLIT3-204ENST00000518140 RTL5Q5HYW3 569 aaPredicted RBP28.89■■■□□ 2.21
SLIT3-204ENST00000518140 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.88■■■□□ 2.21
SLIT3-204ENST00000518140 TTC22Q5TAA0 569 aa28.88■■■□□ 2.21
SLIT3-204ENST00000518140 RAB11FIP3O75154 756 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 TSHZ3Q63HK5 1081 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 RHPN1Q8TCX5 695 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 TJP1Q07157 1748 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 AFDNP55196 1824 aaKnown RBP28.87■■■□□ 2.21
SLIT3-204ENST00000518140 H7C1W4 665 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 CWC25Q9NXE8 425 aaPredicted RBP28.87■■■□□ 2.21
SLIT3-204ENST00000518140 SALL3Q9BXA9 1300 aa28.87■■■□□ 2.21
SLIT3-204ENST00000518140 PALLDQ8WX93 1383 aa28.86■■■□□ 2.21
SLIT3-204ENST00000518140 PDE1AP54750 535 aa28.86■■■□□ 2.21
SLIT3-204ENST00000518140 HLFQ16534 295 aa28.86■■■□□ 2.21
SLIT3-204ENST00000518140 INTS5Q6P9B9 1019 aaKnown RBP28.86■■■□□ 2.21
SLIT3-204ENST00000518140 TCIRG1Q13488 830 aa28.85■■■□□ 2.21
SLIT3-204ENST00000518140 KIF6Q6ZMV9 814 aa28.85■■■□□ 2.21
SLIT3-204ENST00000518140 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
SLIT3-204ENST00000518140 KLHDC4Q8TBB5 520 aa28.84■■■□□ 2.21
SLIT3-204ENST00000518140 CCDC191Q8NCU4 936 aa28.84■■■□□ 2.21
SLIT3-204ENST00000518140 MAP3K15Q6ZN16 1313 aa28.84■■■□□ 2.21
SLIT3-204ENST00000518140 THSD7AQ9UPZ6 1657 aa28.84■■■□□ 2.21
SLIT3-204ENST00000518140 NUTM1Q86Y26 1132 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 KIF1BPQ96EK5 621 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 OSBPL3Q9H4L5 887 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 TRPC5Q9UL62 973 aaPredicted RBP28.82■■■□□ 2.2
SLIT3-204ENST00000518140 ATRNO75882 1429 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 CRKLP46109 303 aaKnown RBP28.82■■■□□ 2.2
SLIT3-204ENST00000518140 KCNQ4P56696 695 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 TBC1D2BQ9UPU7 963 aa28.82■■■□□ 2.2
SLIT3-204ENST00000518140 IL6STP40189 918 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 OS9Q13438 667 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 SMARCC1Q92922 1105 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 ONECUT3O60422 494 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 FOXO4P98177 505 aa28.81■■■□□ 2.2
SLIT3-204ENST00000518140 RABL6Q3YEC7 729 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 QTRT2Q9H974 415 aaKnown RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.81■■■□□ 2.2
SLIT3-204ENST00000518140 SDSP20132 328 aa28.8■■■□□ 2.2
SLIT3-204ENST00000518140 MX1P20591 662 aa28.8■■■□□ 2.2
SLIT3-204ENST00000518140 MFAP1P55081 439 aaKnown RBP28.8■■■□□ 2.2
SLIT3-204ENST00000518140 GIGYF2Q6Y7W6 1299 aaKnown RBP28.8■■■□□ 2.2
SLIT3-204ENST00000518140 TBC1D9Q6ZT07 1266 aa28.8■■■□□ 2.2
SLIT3-204ENST00000518140 CCDC87Q9NVE4 849 aa28.8■■■□□ 2.2
SLIT3-204ENST00000518140 HSP90AB4PQ58FF6 505 aa28.79■■■□□ 2.2
SLIT3-204ENST00000518140 COL15A1P39059 1388 aa28.79■■■□□ 2.2
SLIT3-204ENST00000518140 SEPT12Q8IYM1 358 aa28.79■■■□□ 2.2
SLIT3-204ENST00000518140 SIL1Q9H173 461 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms