RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 MASTLQ96GX5 879 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
TRAPPC9-203ENST00000517667 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
TRAPPC9-203ENST00000517667 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
TRAPPC9-203ENST00000517667 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
TRAPPC9-203ENST00000517667 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC9-203ENST00000517667 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-203ENST00000517667 AMER1Q5JTC6 1135 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-203ENST00000517667 CCDC24Q8N4L8 307 aa15.49■□□□□ 0.07
TRAPPC9-203ENST00000517667 FMNL2Q96PY5 1086 aa15.49■□□□□ 0.07
TRAPPC9-203ENST00000517667 TAF1DQ9H5J8 278 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC9-203ENST00000517667 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
TRAPPC9-203ENST00000517667 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
TRAPPC9-203ENST00000517667 CAMTA2O94983 1202 aa15.47■□□□□ 0.07
TRAPPC9-203ENST00000517667 VEGFBP49765 207 aa15.47■□□□□ 0.07
TRAPPC9-203ENST00000517667 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
TRAPPC9-203ENST00000517667 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 DZIP3Q86Y13 1208 aaKnown RBP15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 HACL1Q9UJ83 578 aa15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
TRAPPC9-203ENST00000517667 A1BGP04217 495 aa15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 NPR1P16066 1061 aa15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 NBPF5PQ86XG9 351 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 C7orf43Q8WVR3 580 aa15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 WBP1LQ9NX94 342 aa15.45■□□□□ 0.06
TRAPPC9-203ENST00000517667 RASSF10A6NK89 507 aa15.44■□□□□ 0.06
TRAPPC9-203ENST00000517667 RTKN2Q8IZC4 609 aa15.44■□□□□ 0.06
TRAPPC9-203ENST00000517667 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
TRAPPC9-203ENST00000517667 CEMIPQ8WUJ3 1361 aa15.44■□□□□ 0.06
TRAPPC9-203ENST00000517667 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC9-203ENST00000517667 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 THSD7BQ9C0I4 1608 aa15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 RGL2O15211 777 aa15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 EPHX2P34913 555 aa15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 LBX1P52954 281 aa15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 MAP2K1Q02750 393 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC9-203ENST00000517667 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC9-203ENST00000517667 BTBD11A6QL63 1104 aa15.42■□□□□ 0.06
TRAPPC9-203ENST00000517667 DEFB115Q30KQ5 88 aa15.42■□□□□ 0.06
TRAPPC9-203ENST00000517667 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
TRAPPC9-203ENST00000517667 U2SURPO15042 1029 aaKnown RBP15.41■□□□□ 0.06
TRAPPC9-203ENST00000517667 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
TRAPPC9-203ENST00000517667 GPC2Q8N158 579 aa15.41■□□□□ 0.06
TRAPPC9-203ENST00000517667 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC9-203ENST00000517667 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
TRAPPC9-203ENST00000517667 FZD9O00144 591 aa15.4■□□□□ 0.06
TRAPPC9-203ENST00000517667 SLC34A2O95436 690 aa15.4■□□□□ 0.06
TRAPPC9-203ENST00000517667 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
TRAPPC9-203ENST00000517667 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-203ENST00000517667 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-203ENST00000517667 HSPA8P11142 646 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 CC2D1BQ5T0F9 858 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 ABHD8Q96I13 439 aa15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
TRAPPC9-203ENST00000517667 MAP1SQ66K74 1059 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-203ENST00000517667 PSMD1Q99460 953 aa15.38■□□□□ 0.05
TRAPPC9-203ENST00000517667 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC9-203ENST00000517667 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
TRAPPC9-203ENST00000517667 KIF7Q2M1P5 1343 aa15.38■□□□□ 0.05
TRAPPC9-203ENST00000517667 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
TRAPPC9-203ENST00000517667 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC9-203ENST00000517667 SNRPA1P09661 255 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-203ENST00000517667 BEGAINQ9BUH8 593 aa15.37■□□□□ 0.05
TRAPPC9-203ENST00000517667 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 SNED1Q8TER0 1413 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 KCNQ3O43525 872 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 GTF2E1P29083 439 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 ECE1P42892 770 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 PIP4K2AP48426 406 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 FAM161AQ3B820 660 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRAPPC9-203ENST00000517667 LTBP1Q14766 1721 aa15.35■□□□□ 0.05
TRAPPC9-203ENST00000517667 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
TRAPPC9-203ENST00000517667 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
TRAPPC9-203ENST00000517667 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
TRAPPC9-203ENST00000517667 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
TRAPPC9-203ENST00000517667 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-203ENST00000517667 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
TRAPPC9-203ENST00000517667 NUP98P52948 1817 aa15.33■□□□□ 0.05
TRAPPC9-203ENST00000517667 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 CRY2Q49AN0 593 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 CAPNS2Q96L46 248 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
TRAPPC9-203ENST00000517667 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 MLLT1Q03111 559 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 USP50Q70EL3 339 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC9-203ENST00000517667 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms